Pre_GI: BLASTP Hits

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Query: NC_009439:4913767:4935384 Pseudomonas mendocina ymp, complete genome

Start: 4935384, End: 4936079, Length: 696

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003909:2798622:2815395281539528164741080Bacillus cereus ATCC 10987, complete genomeacetyltransferase, GNAT family8e-0960.8
NC_008529:264000:269995269995270549555Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeAmidase5e-0651.2
NC_016626:1825845:185396218539621854588627Burkholderia sp. YI23 plasmid byi_1p, complete sequenceamidase4e-1271.6
NC_002689:770326:787296787296787823528Thermoplasma volcanium GSS1, complete genomeAmidase (nicotinamidase-related)9e-1580.5
NC_016885:809000:814982814982815587606Pyrobaculum oguniense TE7 chromosome, complete genomeAmidases related to nicotinamidase7e-1374.3
NC_011969:2706000:2723969272396927250481080Bacillus cereus Q1 chromosome, complete genomeGNAT family acetyltransferase2e-0756.2
NC_013353:2134556:214002321400232140589567Escherichia coli O103:H2 str. 12009, complete genomehydrolase8e-0960.5
NC_008027:2331617:235305123530512353611561Pseudomonas entomophila L48, complete genomehydrolase, isochorismatase family9e-0960.5
NC_000964:521975:552159552159552701543Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0963.2
NC_003106:2496232:251360625136062514166561Sulfolobus tokodaii str. 7, complete genomehypothetical protein1e-0757
NC_019896:1483073:149341814934181493981564Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein5e-0858.2
NC_003295:2787371:280077928007792801369591Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-1067
NC_017208:2942554:296110529611052961635531Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeisochorismatase3e-0755.5
NC_017195:2498113:253117525311752531741567Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeisochorismatase4e-0858.2
NC_016792:226917:245912245912246442531Bacillus cereus NC7401 plasmid pNCcld, complete sequenceisochorismatase3e-0858.9
NC_008600:2792584:280927028092702809800531Bacillus thuringiensis str. Al Hakam, complete genomeisochorismatase4e-0858.2
NC_016779:312500:321983321983322546564Bacillus cereus F837/76 chromosome, complete genomeisochorismatase4e-0755.1
NC_005957:2756000:277295927729592773465507Bacillus thuringiensis serovar konkukian str. 97-27, completeisochorismatase3e-0858.9
NC_014335:2718000:273618127361812736711531Bacillus cereus biovar anthracis str. CI chromosome, completeisochorismatase3e-0858.9
NC_016779:2693790:271063027106302711160531Bacillus cereus F837/76 chromosome, complete genomeisochorismatase4e-0858.2
NC_011973:70764:919029190292393492Bacillus cereus Q1 plasmid pBc239, complete sequenceIsochorismatase8e-0857.4
NC_005877:665092:690138690138690668531Picrophilus torridus DSM 9790, complete genomeisochorismatase1e-0653.1
NC_006274:2779380:279748627974862798016531Bacillus cereus E33L, complete genomeisochorismatase3e-0858.9
NC_016830:4999946:500555250055525006142591Pseudomonas fluorescens F113 chromosome, complete genomeisochorismatase1e-0757
NC_008319:962968:984760984760985380621Synechococcus sp. CC9311, complete genomeisochorismatase family protein1e-0653.1
NC_017200:345502:354123354123354686564Bacillus thuringiensis serovar finitimus YBT-020 chromosome,isochorismatase family protein2e-0858.9
NC_014172:278260:281490281490282020531Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequenceisochorismatase family protein3e-0858.9
NC_012659:2715651:273346227334622733992531Bacillus anthracis str. A0248, complete genomeisochorismatase family protein3e-0858.5
NC_003997:2715623:273343427334342733964531Bacillus anthracis str. Ames, complete genomeisochorismatase family protein3e-0858.5
NC_004668:3053119:306601730660173066562546Enterococcus faecalis V583, complete genomeisochorismatase family protein2e-0756.2
NC_011772:2860000:287884428788442879374531Bacillus cereus G9842, complete genomeisochorismatase family protein4e-0755.1
NC_005945:2716000:273389727338972734427531Bacillus anthracis str. Sterne, complete genomeisochorismatase family protein3e-0858.5
NC_010723:3499291:350750535075053508071567Clostridium botulinum E3 str. Alaska E43, complete genomeisochorismatase family protein1e-0653.5
NC_008601:1151653:115894311589431159515573Francisella tularensis subsp. novicida U112, complete genomeisochorismatase family protein8e-1684
NC_007530:2716885:273356227335622734092531Bacillus anthracis str. 'Ames Ancestor', complete genomeisochorismatase family protein3e-0858.5
NC_011655:171639:190634190634191164531Bacillus cereus AH187 plasmid pAH187_270, complete sequenceisochorismatase family protein3e-0858.9
NC_011773:2782465:279924927992492799779531Bacillus cereus AH820 chromosome, complete genomeisochorismatase family protein3e-0858.5
NC_010172:57500:712657126571876612Methylobacterium extorquens PA1, complete genomeisochorismatase hydrolase5e-0754.7
NC_013421:3093995:310341331034133103937525Pectobacterium wasabiae WPP163, complete genomeisochorismatase hydrolase2e-0652.8
NC_013131:7437831:744095674409567441681726Catenulispora acidiphila DSM 44928, complete genomeisochorismatase hydrolase6e-49194
NC_013849:1034472:105592510559251056461537Ferroglobus placidus DSM 10642 chromosome, complete genomeisochorismatase hydrolase1e-1273.6
NC_011666:1923776:192487819248781925447570Methylocella silvestris BL2, complete genomeisochorismatase hydrolase4e-0962
NC_014828:1632000:163621316362131636779567Ethanoligenens harbinense YUAN-3 chromosome, complete genomeisochorismatase hydrolase1e-0860.1
NC_011992:863174:879440879440880024585Acidovorax ebreus TPSY, complete genomeisochorismatase hydrolase6e-0857.8
NC_009524:861500:862824862824863372549Psychrobacter sp. PRwf-1 chromosome, complete genomeisochorismatase hydrolase2e-0755.8
NC_010725:4618000:462891546289154629622708Methylobacterium populi BJ001, complete genomeisochorismatase hydrolase1e-0653.5
NC_012914:5618000:564655656465565647239684Paenibacillus sp. JDR-2, complete genomeisochorismatase hydrolase8e-56216
NC_013855:1268424:129186312918631292423561Azospirillum sp. B510 plasmid pAB510a, complete sequenceisochorismatase hydrolase9e-1373.9
NC_013939:1417750:142337214233721423887516Deferribacter desulfuricans SSM1, complete genomeisochorismatase hydrolase4e-1065.1
NC_015320:743983:743983743983744516534Archaeoglobus veneficus SNP6 chromosome, complete genomeisochorismatase hydrolase1e-0963.5
NC_014840:205723:263173263173263763591Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceisochorismatase hydrolase3e-0962.4
NC_007802:1240989:125184112518411252473633Jannaschia sp. CCS1, complete genomeisochorismatase hydrolase1e-0860.1
NC_014830:3438504:349372234937223494315594Intrasporangium calvum DSM 43043 chromosome, complete genomeisochorismatase hydrolase2e-0859.3
NC_009663:946285:952888952888953454567Sulfurovum sp. NBC37-1, complete genomeisochorismatase hydrolase3e-0858.5
NC_013850:3340882:335239633523963352986591Klebsiella variicola At-22 chromosome, complete genomeisochorismatase hydrolase2e-0756.2
NC_008148:1711679:171707017170701717699630Rubrobacter xylanophilus DSM 9941, complete genomeisochorismatase hydrolase1e-0653.1
NC_021150:68251:801248012480687564Azotobacter vinelandii CA6, complete genomeIsochorismatase hydrolase5e-0651.6
NC_015320:1159613:116892511689251169581657Archaeoglobus veneficus SNP6 chromosome, complete genomeisochorismatase hydrolase7e-1787.4
NC_010511:2163570:216295021629502163573624Methylobacterium sp. 4-46 chromosome, complete genomeisochorismatase hydrolase2e-1272.8
NC_008609:1976403:200994120099412010501561Pelobacter propionicus DSM 2379, complete genomeisochorismatase hydrolase2e-1066.2
NC_008701:391216:400802400802401407606Pyrobaculum islandicum DSM 4184, complete genomeisochorismatase hydrolase2e-0962.8
NC_015565:1163148:117081611708161171382567Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeisochorismatase hydrolase1e-0756.6
NC_015563:3074691:308127230812723081865594Delftia sp. Cs1-4 chromosome, complete genomeisochorismatase hydrolase1e-0653.5
NC_012673:2064298:208566520856652086246582Exiguobacterium sp. AT1b, complete genomeisochorismatase hydrolase4e-0652
NC_012560:68251:801248012480687564Azotobacter vinelandii DJ, complete genomeIsochorismatase hydrolase5e-0651.6
NC_015675:2247960:224796022479602248628669Mesorhizobium opportunistum WSM2075 chromosome, complete genomeisochorismatase hydrolase3e-40165
NC_007005:3414579:343049934304993431137639Pseudomonas syringae pv. syringae B728a, complete genomeIsochorismatase hydrolase5e-1478.2
NC_011961:528837:538092538092538706615Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceisochorismatase hydrolase9e-1063.9
NC_009922:411434:417831417831418433603Alkaliphilus oremlandii OhILAs, complete genomeisochorismatase hydrolase2e-0963.2
NC_016023:1658377:166142116614211661975555Bacillus coagulans 36D1 chromosome, complete genomeisochorismatase hydrolase2e-0859.3
NC_014363:1396912:141891314189131419503591Olsenella uli DSM 7084 chromosome, complete genomeisochorismatase hydrolase8e-0857.4
NC_013595:3388000:340895434089543409538585Streptosporangium roseum DSM 43021, complete genomeisochorismatase hydrolase2e-0756.2
NC_021150:2348214:237608323760832376676594Azotobacter vinelandii CA6, complete genomeIsochorismatase hydrolase protein4e-0651.6
NC_012560:2348202:237607123760712376664594Azotobacter vinelandii DJ, complete genomeIsochorismatase hydrolase protein4e-0651.6
NC_020291:1045058:104635610463561046952597Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeisochorismatase PhzA5e-0754.7
NC_015733:3736104:374210137421013742679579Pseudomonas putida S16 chromosome, complete genomeisochorismatase superfamily hydrolase9e-1270.5
NC_017316:2581781:259572125957212596266546Enterococcus faecalis OG1RF chromosome, complete genomeisochorismatase transposase4e-0858.5
NC_009009:540992:560945560945561502558Streptococcus sanguinis SK36, complete genomeIsochorismitase family protein, putative5e-0651.6
NC_015567:2420169:243430824343082434949642Serratia sp. AS9 chromosome, complete genomeN-carbamoylsarcosine amidase7e-0754.3
NC_015566:2420287:243442624344262435067642Serratia sp. AS12 chromosome, complete genomeN-carbamoylsarcosine amidase7e-0754.3
NC_008054:272801:273997273997274551555Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeNicotinamidase5e-0651.2
NC_004193:375416:594492594492595043552Oceanobacillus iheyensis HTE831, complete genomenicotinamidase5e-0961.2
NC_017047:2260118:229055822905582291187630Rahnella aquatilis HX2 chromosome, complete genomenicotinamidase/pyrazinamidase4e-0755.1
AP010958:2134556:214002321400232140589567Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted hydrolase8e-0960.5
NC_008212:61567:803368033680917582Haloquadratum walsbyi DSM 16790, complete genomeprobable isochorismatase; probable nicotinamidase; probable N-carbamoylsarcosine amidase7e-0754.3
NC_010943:2422838:243933924393392439770432Stenotrophomonas maltophilia K279a, complete genomeputative amidase2e-0859.3
NC_020209:2119845:214328521432852143869585Pseudomonas poae RE*1-1-14, complete genomeputative hydrolase7e-1064.3
NC_016048:1694631:170541717054171706214798Oscillibacter valericigenes Sjm18-20, complete genomeputative hydrolase2e-1272.8
NC_020244:2509000:254817125481712548737567Bacillus subtilis XF-1, complete genomeputative hydrolase5e-0858.2
NC_008800:2127918:212835421283542129046693Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative isochorismatase4e-1685.1
NC_011001:2085986:214806921480692148680612Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative isochorismatase6e-0857.8
NC_015224:2061951:206385820638582064646789Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative isochorismatase6e-1684.3
NC_016845:2729654:274155527415552742064510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative isochorismatase hydrolase2e-0652.8
NC_010407:3132683:315012531501253150856732Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative isochorismatase hydrolase6e-57220
NC_009648:1956070:196579219657921966301510Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative isochorismatase hydrolase7e-0650.8
NC_007384:1086025:110887111088711109605735Shigella sonnei Ss046, complete genomeputative synthetase1e-1480.5
NC_015680:369777:378690378690379235546Pyrococcus yayanosii CH1 chromosome, complete genomepyrazinamidase/nicotinamidase1e-0963.5
NC_000961:888000:907656907656908198543Pyrococcus horikoshii OT3, complete genomepyrazinamidase/nicotinamidase5e-0961.2
NC_015276:1531159:153224815322481532994747Marinomonas mediterranea MMB-1 chromosome, complete genomepyrimidine utilization protein B3e-1685.5
NC_014562:1935088:195049819504981951184687Pantoea vagans C9-1 chromosome, complete genomeUncharacterized isochorismatase family protein6e-60230
NC_006322:3198829:321455432145543215105552Bacillus licheniformis ATCC 14580, complete genomeYueJ8e-0857.4