Pre_GI: BLASTP Hits

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Query: NC_009439:442890:479186 Pseudomonas mendocina ymp, complete genome

Start: 479186, End: 479572, Length: 387

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:4312892:431638943163894316775387Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-34142
NC_010611:240839:245551245551245961411Acinetobacter baumannii ACICU, complete genomepredicted membrane protein3e-1684
NC_008391:271254:297686297686298057372Burkholderia cepacia AMMD chromosome 2, complete sequencemembrane protein-like protein2e-1581.3
NC_011566:1016858:104100710410071041390384Shewanella piezotolerans WP3, complete genomehypothetical protein7e-0752.8
NC_018868:3036205:306754930675493067935387Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein7e-0752.8