Pre_GI: BLASTP Hits

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Query: NC_009439:3535152:3547696 Pseudomonas mendocina ymp, complete genome

Start: 3547696, End: 3548514, Length: 819

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010943:1332243:133841213384121339266855Stenotrophomonas maltophilia K279a, complete genomeputative NAD(P)H dehydrogenase [quinone]7e-102370
NC_015690:4592582:461160246116024612390789Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-101368
NC_020126:7372685:737858073785807379413834Myxococcus stipitatus DSM 14675, complete genomeNAD(P)H oxidoreductase9e-71266
NC_015376:903939:912855912855913697843Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative NADPH-quinone reductase2e-69262
NC_015379:4249238:426380942638094264600792Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative dehydrogenase1e-64246
NC_016830:2642881:264742926474292648220792Pseudomonas fluorescens F113 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)5e-64244
NC_007777:3000941:302234330223433023122780Frankia sp. CcI3, complete genomeNAD(P)H dehydrogenase (quinone)8e-63240
NC_011365:1865687:189236418923641893155792Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRibosyldihydronicotinamide dehydrogenase (quinone)3e-61235
NC_016027:2580477:258503325850332585827795Gluconacetobacter xylinus NBRC 3288, complete genomeNAD(P)H dehydrogenase (quinone)7e-61233
NC_010125:1011430:102107110210711021862792Gluconacetobacter diazotrophicus PAl 5, complete genomeputative NAD(P)H oxidoreductase9e-61233
NC_008314:2611873:262555326255532626329777Ralstonia eutropha H16 chromosome 2, complete sequenceNAD(P)H dehydrogenase [quinone]1e-59229
NC_015138:3160764:316882931688293169617789Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeribosyldihydronicotinamide dehydrogenase (quinone)5e-59228
NC_013169:1845735:186294918629491863743795Kytococcus sedentarius DSM 20547, complete genomeputative NADPH-quinone reductase (modulator of drug activity B)3e-46185
NC_016906:408720:428459428459429220762Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative NAD(P)H dehydrogenase (quinone)2e-43176
NC_002947:4167500:424302642430264243733708Pseudomonas putida KT2440, complete genomeNAD(P)H quinone oxidoreductase, putative3e-42172
NC_006526:1976779:200340820034082004124717Zymomonas mobilis subsp. mobilis ZM4, complete genomeputative NAD(P)H quinone oxidoreductase2e-40166
NC_015563:4206112:421723842172384217960723Delftia sp. Cs1-4 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)6e-29127
NC_014839:170000:183595183595184119525Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceNAD(P)H dehydrogenase (quinone)6e-1891.7
NC_015660:1784553:178533817853381785946609Geobacillus thermoglucosidasius C56-YS93 chromosome, completeNAD(P)H dehydrogenase (quinone)1e-1686.7
NC_014650:1763308:176409317640931764704612Geobacillus sp. Y4.1MC1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-1582.4
NC_015942:2316354:234748723474872348056570Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)4e-1582
NC_013173:3890370:390309039030903903668579Desulfomicrobium baculatum DSM 4028, complete genomeNAD(P)H dehydrogenase (quinone)2e-1479.3
NC_009801:995396:999193999193999783591Escherichia coli E24377A, complete genomeNADPH-dependent FMN reductase4e-1479
NC_008752:725189:768815768815769420606Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNAD(P)H dehydrogenase (quinone)5e-1478.6
NC_016010:65949:754477544776055609Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeNAD(P)H oxidoreductase2e-1376.6
NC_016047:683368:689861689861690484624Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completegeneral stress protein 143e-1375.9
NC_015690:3477573:351107935110793511609531Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-1375.9
NC_015760:2009425:202271620227162023279564Streptococcus salivarius CCHSS3, complete genomeribosyldihydronicotinamide dehydrogenase4e-1375.5
NC_008752:3902637:391373839137383914406669Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNAD(P)H dehydrogenase (quinone)5e-1375.1
NC_019896:1483073:151785415178541518378525Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePutative NAD(P)H oxidoreductase YrkL8e-1374.3
NC_020244:2509000:252129525212952521819525Bacillus subtilis XF-1, complete genomehypothetical protein9e-1374.3
NC_021066:1778000:178067417806741781231558Raoultella ornithinolytica B6, complete genomeFlavodoxin 21e-1273.9
NC_015690:3941113:397102739710273971611585Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-1273.9
NC_020410:495184:501545501545502069525Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative NAD(P)H oxidoreductase1e-1273.6
NC_019842:484933:501660501660502184525Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,NADPH oxidoreductase2e-1273.2
NC_000964:2702376:270740127074012707925525Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1273.2
NC_020181:1317647:133207413320741332646573Enterobacter aerogenes EA1509E, complete genomeNAD(P)H oxidoreductase YRKL ; Putative NADPH-quinone reductase (modulator of drug activity B); Flavodoxin 23e-1272.8
NC_011283:785973:803823803823804386564Klebsiella pneumoniae 342 chromosome, complete genomeflavodoxin fold family protein3e-1272.4
NC_009725:496443:502817502817503341525Bacillus amyloliquefaciens FZB42, complete genomeYrkL4e-1272
NC_011894:5056901:507488150748815075474594Methylobacterium nodulans ORS 2060, complete genomeNAD(P)H dehydrogenase (quinone)1e-1170.5
NC_012918:3203136:321300032130003213608609Geobacter sp. M21 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-1169.7
NC_009802:1977596:199540919954091995969561Campylobacter concisus 13826, complete genomegeneral stress protein 14 (GSP14)2e-1169.7
NC_013416:1588369:159845215984521599063612Aggregatibacter actinomycetemcomitans D11S-1, complete genomeNAD dehydrogenase4e-1168.6
NC_015500:1204501:120918312091831209773591Treponema brennaborense DSM 12168 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)4e-1168.6
NC_016513:1924242:193438219343821934993612Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeNAD dehydrogenase6e-1168.2
NC_007963:3113739:313042531304253131009585Chromohalobacter salexigens DSM 3043, complete genomeNAD(P)H dehydrogenase (quinone)9e-1167.4
NC_013592:2968500:298287829828782983621744Dickeya dadantii Ech586, complete genomeNAD(P)H dehydrogenase (quinone)1e-1067
NC_008463:2654014:266696226669622667552591Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative NADPH specific quinone oxidoreductase2e-1066.6
NC_006582:3827844:383840638384063838999594Bacillus clausii KSM-K16, complete genomeNAD(P)H oxidoreductase2e-1066.6
NC_013892:2108175:214182421418242142402579Xenorhabdus bovienii SS-2004 chromosome, complete genomeflavoprotein modulator of drug activity B2e-1066.6
NC_018643:807405:819887819887820456570Alpha proteobacterium HIMB5 chromosome, complete genomeflavodoxin-like protein3e-1065.9
NC_004547:1062410:106420710642071064794588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable NAD(P)H oxidoreductase4e-1065.5
NC_007005:98488:131737131737132393657Pseudomonas syringae pv. syringae B728a, complete genomeNAD(P)H dehydrogenase (quinone)4e-1065.5
NC_016612:5231065:526042152604215260936516Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-1065.1
NC_009659:997779:101056710105671011118552Janthinobacterium sp. Marseille chromosome, complete genomeNAD(P)H2 dehydrogenase6e-1064.7
NC_015277:5211779:521177952117795212381603Sphingobacterium sp. 21 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)8e-1064.3
NC_015172:1255956:125766412576641258248585Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-0963.9
UCMB5137:1:172381723817765528Bacillus atrophaeus UCMB-5137YrkL1e-0963.9
NC_002163:1471517:147662214766221477200579Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeMdaB protein homolog1e-0963.5
NC_009512:3334579:335228233522823352860579Pseudomonas putida F1, complete genomeNAD(P)H dehydrogenase (quinone)1e-0963.5
NC_007086:71493:755517555176069519Xanthomonas campestris pv. campestris str. 8004, complete genomeNAD(P)H oxidoreductase2e-0963.2
NC_003902:71494:755527555276070519Xanthomonas campestris pv. campestris str. ATCC 33913, completeNAD(P)H oxidoreductase2e-0963.2
NC_014643:2056280:206732320673232067877555Rothia dentocariosa ATCC 17931 chromosome, complete genomeglutathione-regulated potassium-efflux system ancillary protein KefF3e-0962.8
NC_014643:2056280:206812520681252068673549Rothia dentocariosa ATCC 17931 chromosome, complete genomegeneral stress protein 144e-0962.4
NC_015953:6212366:623664362366436237263621Streptomyces sp. SirexAA-E chromosome, complete genomeNAD(P)H dehydrogenase (quinone)6e-0961.6
NC_020829:2022000:202271920227192023309591Pseudomonas denitrificans ATCC 13867, complete genomeNAD(P)H dehydrogenase (quinone)6e-0961.6
NC_013949:1163456:116531511653151165809495Helicobacter mustelae 12198 chromosome, complete genomeNAD(P)H oxidoreductase6e-0961.6
NC_018720:1468397:147617714761771476596420Bifidobacterium asteroides PRL2011 chromosome, complete genome9e-0960.8
NC_014166:2149984:215596321559632156532570Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeNAD(P)H dehydrogenase1e-0860.8
NC_016935:2503071:254593925459392546499561Paenibacillus mucilaginosus 3016 chromosome, complete genomeNADH dehydrogenase1e-0860.5
NC_015690:1967244:201305220130522013612561Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-0860.5
NC_015968:74124:766707667077197528Enterobacter asburiae LF7a chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-0859.7
NC_015759:726612:732824732824733411588Weissella koreensis KACC 15510 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)7e-0857.8
NC_003919:103000:105661105661106137477Xanthomonas axonopodis pv. citri str. 306, complete genomeNAD(P)H oxidoreductase8e-0857.8
NC_003295:2507850:252945725294572530038582Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-0757.4
NC_015510:1096755:110123611012361101811576Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-0757.4
NC_008599:1325155:133904913390491339573525Campylobacter fetus subsp. fetus 82-40, complete genomegeneral stress protein 141e-0757
NC_009715:1877825:188243718824371882964528Campylobacter curvus 525.92 chromosome, complete genomegeneral stress protein 14 (GSP14)1e-0757
NC_013592:2968500:299028929902892990882594Dickeya dadantii Ech586, complete genomeNAD(P)H dehydrogenase (quinone)2e-0756.2
NC_015172:850802:874491874491875084594Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-0756.2
NC_007645:3478630:349763134976313498209579Hahella chejuensis KCTC 2396, complete genomeputative NADPH-quinone reductase (modulator of drug activity B)9e-0754.3
NC_004578:4781326:479823347982334798754522Pseudomonas syringae pv. tomato str. DC3000, complete genomeglutathione-regulated potassium-efflux system ancillary protein1e-0653.9