Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3124766 Pseudomonas mendocina ymp, complete genome

Start: 3124766, End: 3125950, Length: 1185

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:4273126427312642742801155Pseudomonas putida S16 chromosome, complete genomeflagellar rod assembly protein/muramidase FlgJ3e-109395
NC_015424:2917817:2919824291982429208971074Aeromonas veronii B565 chromosome, complete genomepeptidoglycan hydrolase FlgJ8e-56218
NC_015276:3669263:3690402369040236914181017Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar rod assembly protein/muramidase FlgJ1e-37157
NC_009092:1504363:1561336156133615623611026Shewanella loihica PV-4, complete genomeflagellar rod assembly protein/muramidase FlgJ3e-37156
NC_015723:280368:2803682803682814111044Cupriavidus necator N-1 chromosome 2, complete sequencepeptidoglycan hydrolase FlgJ6e-33142
NC_015850:1497998:150273315027331503692960Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar protein flgJ3e-31136
NC_012880:1765920:181480918148091815786978Dickeya dadantii Ech703, complete genomeflagellar rod assembly protein/muramidase FlgJ1e-30134
NC_013892:1890500:189241918924191893384966Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthesis protein7e-27121
NC_013947:2351208:236981923698192370427609Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase7e-23108
NC_015857:265721:2671172671172692432127Brucella pinnipedialis B2/94 chromosome chromosome 1, completeflagellar protein FlgJ3e-21103
NC_017244:264921:2663142663142679091596Brucella melitensis M28 chromosome chromosome 1, complete sequenceFlagellar protein FlgJ3e-21103
NC_017246:264917:2663102663102679051596Brucella melitensis M5-90 chromosome chromosome I, completeflagellar protein FlgJ:mannosyl-glycoprotein endo-beta-N-acetylglucosamidase3e-21103
NC_017248:264847:2665332665332681281596Brucella melitensis NI chromosome chromosome I, complete sequenceflagellar protein FlgJ3e-21103
NC_003317:1719546:1734940173494017368561917Brucella melitensis 16M chromosome I, complete sequenceFLAGELLAR PROTEIN FLGJ2e-21103
NC_010169:261473:2627912627912649172127Brucella suis ATCC 23445 chromosome I, complete sequencePeptidoglycan hydrolase flgJ2e-21103
NC_016795:9384:2476724767266861920Brucella abortus A13334 chromosome 1, complete sequenceflagellar protein FlgJ2e-21103
NC_006932:266000:2675762675762694921917Brucella abortus biovar 1 str. 9-941 chromosome I, completeFlgJ2e-21103
NC_007618:262415:2637392637392658592121Brucella melitensis biovar Abortus 2308 chromosome I, completeFlagellar protein FlgJ:Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase2e-21103
NC_010742:264433:2657572657572678772121Brucella abortus S19 chromosome 1, complete sequenceFlagellar protein FlgJ2e-21103
NC_020291:1593143:160066316006631601619957Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosamidase7e-1995.1
NC_015425:1295261:132561013256101326428819Clostridium botulinum BKT015925 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase-like protein2e-1790.5
NC_012724:2202173:221626222162622216723462Burkholderia glumae BGR1 chromosome 1, complete genomeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase8e-1788.6
NC_012926:727716:733618733618734079462Streptococcus suis BM407 chromosome, complete genome8e-1788.2
NC_012925:1125876:114506211450621145523462Streptococcus suis P1/7, complete genome8e-1788.2
NC_007432:654904:6970316970316980411011Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein2e-1687.4
NC_012984:2709148:2712555271255527143901836Lactobacillus plantarum JDM1, complete genomemuramidase1e-1584.3
NC_013162:1015500:102690410269041027416513Capnocytophaga ochracea DSM 7271, complete genome3e-1583.6
NC_006270:3418097:343831634383163439233918Bacillus licheniformis ATCC 14580, complete genomeGlycoside Hydrolase Family 732e-1480.9
NC_016626:400080:4086814086814104261746Burkholderia sp. YI23 plasmid byi_1p, complete sequenceflagellar rod assembly protein/muramidase FlgJ2e-1480.9
NC_006322:3418268:3437694343769434394061713Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-1480.1
NC_009442:1216355:123375612337561234142387Streptococcus suis 05ZYH33 chromosome, complete genomemuramidase (flagellum-specific)4e-1479.3
NC_012491:3088500:310314931031493103832684Brevibacillus brevis NBRC 100599, complete genomeputative peptidoglycan hydrolase9e-1478.2
NC_010483:273080:277344277344277751408Thermotoga sp. RQ2, complete genomeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase2e-1377
NC_008593:1362218:1365917136591713672121296Clostridium novyi NT, complete genomeN-acetylmuramoyl-L-alanine amidase cwlL precursor (Cellwall hydrolase) (Autolysin)2e-1377
NC_014479:1961692:1961692196169219653303639Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative bacterophage-related protein; putative muramidase2e-1377
NC_009617:1487110:149461014946101495569960Clostridium beijerinckii NCIMB 8052 chromosome, complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosamidase3e-1376.6
NC_004606:904323:9159229159229171301209Streptococcus pyogenes SSI-1, complete genomehypothetical protein4e-1376.3
NC_004070:772281:7850347850347862421209Streptococcus pyogenes MGAS315, complete genomeputative holin - phage associated4e-1376.3
NC_013162:769915:792179792179792847669Capnocytophaga ochracea DSM 7271, complete genomeMannosyl-glycoproteinendo-beta-N-acetylglucosami dase9e-1375.1
UCMB5137:2128500:213093121309312131776846Bacillus atrophaeus UCMB-5137exoglucosaminidase2e-1273.9
NC_007297:1379742:1387049138704913882451197Streptococcus pyogenes MGAS5005, complete genomephage-associated cell wall hydrolase2e-1273.6
NC_008021:1374195:1381502138150213826981197Streptococcus pyogenes MGAS9429, complete genomephage-associated cell wall hydrolase2e-1273.6
NC_008023:1398085:1405392140539214065881197Streptococcus pyogenes MGAS2096, complete genomephage-associated cell wall hydrolase2e-1273.6
NC_011978:15059:193371933719747411Thermotoga neapolitana DSM 4359, complete genomeFlagellar-related protein4e-1273.2
NC_008022:1255210:1259007125900712600681062Streptococcus pyogenes MGAS10270, complete genomephage-associated cell wall hydrolase4e-1272.8
NC_000853:648075:668404668404668814411Thermotoga maritima MSB8, complete genomeflagellar-related protein4e-1272.8
NC_011375:1457773:1464736146473614659441209Streptococcus pyogenes NZ131 chromosome, complete genomephage-associated cell wall hydrolase4e-1272.8
NC_008255:1701195:170779117077911708303513Cytophaga hutchinsonii ATCC 33406, complete genomepeptidoglycan hydrolase, glycoside hydrolase family 73 protein5e-1272.8
NC_008024:572916:5866385866385878431206Streptococcus pyogenes MGAS10750, complete genomephage-associated cell wall hydrolase5e-1272.4
NC_003485:602640:6159166159166171211206Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-1272.4
NC_008022:556457:5694605694605706651206Streptococcus pyogenes MGAS10270, complete genomephage-associated cell wall hydrolase5e-1272.4
NC_009332:1269000:1271303127130312725081206Streptococcus pyogenes str. Manfredo chromosome, complete genomephage amidase-like protein5e-1272.4
NC_008021:531730:5681835681835693971215Streptococcus pyogenes MGAS9429, complete genomephage-associated cell wall hydrolase5e-1272.4
NC_006086:987991:992366992366992923558Streptococcus pyogenes MGAS10394, complete genomePhage-associated cell wall hydrolase5e-1272.4
NC_009089:1202261:120799912079991208973975Clostridium difficile 630, complete genomeputative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase7e-1272
NC_013316:1081044:108678210867821087756975Clostridium difficile R20291, complete genomeputative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase7e-1272
NC_003485:1041280:104690010469001047457558Streptococcus pyogenes MGAS8232, complete genomehypothetical protein8e-1271.6
NC_003485:1450045:1454311145431114555161206Streptococcus pyogenes MGAS8232, complete genomehypothetical protein9e-1271.6
NC_006086:1329915:1333928133392813351331206Streptococcus pyogenes MGAS10394, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1171.6
NC_006086:35599:7167071670728721203Streptococcus pyogenes MGAS10394, complete genomePhage-associated cell wall hydrolase2e-1170.9
NC_004070:1231883:1234484123448412356861203Streptococcus pyogenes MGAS315, complete genomeputative cell wall hydrolase, lysin - phage associated2e-1170.9
NC_007296:1230614:1231278123127812324801203Streptococcus pyogenes MGAS6180, complete genomephage-associated cell wall hydrolase2e-1170.9
NC_015975:1493636:1498171149817115003482178Lactobacillus ruminis ATCC 27782 chromosome, complete genomeAutolysin3e-1170.1
NC_009615:1734752:176804917680491768546498Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycoside hydrolase6e-1168.9
NC_020272:1311932:1352382135238213540851704Bacillus amyloliquefaciens IT-45, complete genomeExo-glucosaminidase2e-1067
NC_014720:2420455:242558624255862426028443Caldicellulosiruptor kronotskyensis 2002 chromosome, complete8e-1065.1
UCMB5137:140766:1460991460991477991701Bacillus atrophaeus UCMB-5137N-acetylmuramoyl-L-alanine amidase1e-0861.2
NC_015377:34445:5180251802545612760Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein2e-0860.5
NC_015311:1612366:163473716347371635690954Prevotella denticola F0289 chromosome, complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosaminidase2e-0860.5
NC_014370:1117283:111887311188731119826954Prevotella melaninogenica ATCC 25845 chromosome chromosome I,mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase5e-0859.3
NC_015846:1395358:139535813953581396191834Capnocytophaga canimorsus Cc5 chromosome, complete genomebeta-glycosidase2e-0757.4
NC_019968:552440:575624575624576550927Prevotella dentalis DSM 3688 chromosome 2, complete sequencemuramidase (flagellum-specific)3e-0756.6
NC_006347:3285998:3303102330310233046581557Bacteroides fragilis YCH46, complete genomeputative hemagglutinin3e-0756.6
NC_008011:924392:928086928086928769684Lawsonia intracellularis PHE/MN1-00, complete genomemembrane proteins related to metalloendopeptidases7e-0755.5
NC_009615:1469642:150375015037501504217468Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycoside hydrolase8e-0755.5
NC_015760:123929:123929123929124510582Streptococcus salivarius CCHSS3, complete genomeN-acetylmuramidase1e-0654.3
NC_015501:868909:894214894214895188975Porphyromonas asaccharolytica DSM 20707 chromosome, completeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase2e-0654.3
NC_015164:438000:4456224456224471331512Bacteroides salanitronis DSM 18170 chromosome, complete genomeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase3e-0653.1
NC_018664:201487:219495219495219854360Clostridium acidurici 9a chromosome, complete genomeflagellar protein FlgJ4e-0652.8
NC_007517:480303:481561481561481926366Geobacter metallireducens GS-15, complete genomeflagellar protein FlgJ-like protein6e-0652.4
NC_015164:4053765:4070139407013940716081470Bacteroides salanitronis DSM 18170 chromosome, complete genomeMannosyl-glycoprotein endo-beta-N-acetylglucosamidase1e-0551.6