Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:3104000:3122711 Pseudomonas mendocina ymp, complete genome

Start: 3122711, End: 3124756, Length: 2046

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:4271071427107142731132043Pseudomonas putida S16 chromosome, complete genomeflagellar hook-associated protein FlgK1e-174613
NC_007974:138176:1381761381761400711896Ralstonia metallidurans CH34 chromosome 2, complete sequenceFlagellar hook-associated protein3e-100366
NC_015723:280368:2829332829332848581926Cupriavidus necator N-1 chromosome 2, complete sequenceflagellar hook-associated protein 11e-88327
NC_015424:2917817:2917817291781729198202004Aeromonas veronii B565 chromosome, complete genomeflagellar hook-associated protein FlgK7e-83308
NC_009092:1504363:1562426156242615643421917Shewanella loihica PV-4, complete genomeflagellar hook-associated protein FlgK3e-74280
NC_015276:3669263:3688295368829536902741980Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar hook-associated protein FlgK2e-70267
NC_012855:39751:4802148021499461926Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceflagellar hook-associated protein FlgK6e-70265
NC_015850:1497998:1504097150409715061512055Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar hook-associated protein flgK3e-52207
NC_013892:1890500:1893497189349718951371641Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar hook-filament junction protein 12e-48194
NC_009831:66518:7164071640730131374Shewanella sediminis HAW-EB3, complete genomeflagellar hook-associated protein FlgK2e-40168
NC_007517:480303:4827354827354841681434Geobacter metallireducens GS-15, complete genomeFlagellar hook-associated protein1e-34149
NC_012880:1765920:1815887181588718175421656Dickeya dadantii Ech703, complete genomeflagellar hook-associated protein FlgK1e-31138
NC_018607:135612:1356121356121375251914Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar hook associated protein FlgK5e-30133
NC_019978:2260395:2276720227672022780961377Halobacteroides halobius DSM 5150, complete genomeflagellar hook-associated protein FlgK3e-29130
NC_014831:218696:2186962186962202581563Thermaerobacter marianensis DSM 12885 chromosome, complete genomeflagellar hook-associated protein FlgK5e-27123
NC_010515:1678487:1683517168351716848061290Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar hook-associated protein FlgK3e-26120
NC_009633:760872:7736637736637751441482Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar hook-associated protein FlgK1e-24115
NC_007759:1356439:1375699137569913770901392Syntrophus aciditrophicus SB, complete genomeflagellar hook-associated protein 12e-24114
NC_018664:239000:2492302492302512151986Clostridium acidurici 9a chromosome, complete genomeFlgK-like protein1e-23111
NC_009922:2721343:2727917272791727294851569Alkaliphilus oremlandii OhILAs, complete genomeflagellar hook-associated protein FlgK2e-23111
NC_015172:1075592:1082223108222310837461524Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook-associated protein FlgK2e-22108
NC_012225:1901656:1908183190818319102012019Brachyspira hyodysenteriae WA1, complete genomeflagellar hook-associated protein FlgK9e-23108
NC_021182:2921000:2934156293415629360181863Clostridium pasteurianum BC1, complete genomeflagellar hook-associated protein FlgK1e-21105
NC_020134:2772500:2780411278041127824142004Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar hook-associated protein 12e-21104
NC_020291:4944835:4990554499055449924101857Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-associated protein 13e-21104
NC_016012:561687:5678555678555695911737Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar hook-associated protein FlgK6e-21103
NC_007644:779376:7818647818647833241461Moorella thermoacetica ATCC 39073, complete genomeFlagellar hook-associated protein6e-21103
NC_016584:4363382:4380837438083743823151479Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook-associated protein FlgK3e-21103
NC_008593:1060548:1082564108256410845942031Clostridium novyi NT, complete genomeflagellar hook-associated protein 11e-20102
NC_004557:1826977:1835382183538218371211740Clostridium tetani E88, complete genomeflagellar hook-associated protein 11e-20102
NC_008011:924392:9295069295069316232118Lawsonia intracellularis PHE/MN1-00, complete genomeFlagellar hook-associated protein3e-20100
NC_010723:801215:8035098035098053231815Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar hook-associated protein FlgK4e-20100
NC_020134:2772500:2778775277877527803791605Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar hook-associated protein 17e-2099.4
NC_013522:698114:6985736985737011492577Thermanaerovibrio acidaminovorans DSM 6589, complete genomeflagellar hook-associated protein FlgK1e-1999
NC_015913:624859:6282426282426299781737Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar hook-associated protein1e-1999
NC_009617:4946000:4952124495212449538751752Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook-associated protein FlgK2e-1998.2
NC_015425:1207314:1213982121398212159251944Clostridium botulinum BKT015925 chromosome, complete genomeflagellar hook-associated protein 13e-1997.4
NC_014829:3877701:3884259388425938859111653Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeflagellar hook-associated protein FlgK4e-1997.1
NC_012563:3090954:3104332310433231062001869Clostridium botulinum A2 str. Kyoto, complete genomeflagellar hook-associated protein FlgK4e-1997.1
NC_009495:2876865:2890243289024328921111869Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar hook-associated protein FlgK4e-1997.1
NC_009697:2790277:2803655280365528055231869Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook-associated protein FlgK4e-1997.1
NC_009698:2727203:2740581274058127424491869Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook-associated protein FlgK4e-1997.1
NC_016893:43234:5358453584552331650Wigglesworthia glossinidia endosymbiont of Glossina morsitansFlgK family flagellar hook-associated protein5e-1996.7
NC_012658:2930244:2941817294181729436851869Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar hook-associated protein FlgK5e-1996.7
NC_018664:239000:2477342477342492121479Clostridium acidurici 9a chromosome, complete genomeflagellar hook-associated protein 11e-1895.5
NC_013406:6568273:6586414658641465879761563Paenibacillus sp. Y412MC10 chromosome, complete genomeflagellar hook-associated protein FlgK1e-1895.1
NC_014387:605711:6143986143986162451848Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar hook-associated protein FlgK22e-1894.7
NC_013205:2610956:2647034264703426484791446Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,flagellar hook-associated protein FlgK2e-1894.7
NC_006510:3133965:3157103315710331586981596Geobacillus kaustophilus HTA426, complete genomeflagellar hook-associated protein4e-1894
NC_019897:128610:1749421749421764711530Thermobacillus composti KWC4 chromosome, complete genomeflagellar hook-associated protein FlgK7e-1893.2
NC_014915:3259440:3282847328284732844421596Geobacillus sp. Y412MC52 chromosome, complete genomeflagellar hook-associated protein FlgK6e-1893.2
NC_011567:2556915:2559080255908025606211542Anoxybacillus flavithermus WK1, complete genomeFlagellar hook-associated protein7e-1892.8
NC_017179:281069:3022183022183035281311Clostridium difficile BI1, complete genomeputative flagellar hook-associated protein8e-1892.8
NC_004344:26828:5240652406540431638Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1792.4
NC_009012:2661795:2671575267157526730441470Clostridium thermocellum ATCC 27405, complete genomeflagellar hook-associated protein FlgK1e-1792.4
NC_015577:2143477:2144744214474421466421899Treponema azotonutricium ZAS-9 chromosome, complete genomeflagellar hook-associated protein FlgK1e-1792
NC_017295:2286911:2302647230264723045511905Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar hook-associated protein FlgK2e-1791.7
NC_010516:2900057:2909306290930629111711866Clostridium botulinum B1 str. Okra, complete genomeflagellar hook-associated protein FlgK2e-1791.7
NC_012793:3035978:3045390304539030470151626Geobacillus sp. WCH70, complete genomeflagellar hook-associated protein FlgK3e-1791.3
NC_017297:2905138:2913983291398329158481866Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook-associated protein FlgK4e-1790.5
NC_009699:2901497:2913845291384529157101866Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar hook-associated protein FlgK4e-1790.5
NC_013791:1082951:1102854110285411044251572Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar hook-associated protein FlgK5e-1790.1
NC_009012:2661795:2670009267000926715681560Clostridium thermocellum ATCC 27405, complete genomeflagellar hook-associated protein FlgK7e-1789.7
NC_010520:2937981:2949663294966329515281866Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook-associated protein FlgK6e-1789.7
NC_015172:1075592:1083752108375210852901539Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook-associated protein FlgK2e-1688.2
NC_004193:2553630:2563781256378125652531473Oceanobacillus iheyensis HTE831, complete genomeflagellar hook-associated protein4e-1687
NC_020911:2921925:2977805297780529821154311Octadecabacter antarcticus 307, complete genomeFlgK-like flagellar hook-associated protein6e-1686.3
NC_016641:945284:9539499539499555291581Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar hook-associated protein7e-1686.3
NC_014098:3030274:3052681305268130543031623Bacillus tusciae DSM 2912 chromosome, complete genomeflagellar hook-associated protein FlgK2e-1585.1
NC_016584:4363382:4379307437930743808271521Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook-associated protein FlgK2e-1584.7
NC_009454:2201987:2219180221918022205951416Pelotomaculum thermopropionicum SI, complete genomeflagellar hook-associated protein FlgK3e-1584.3
NC_014328:1046958:1060804106080410627201917Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeFlagellar hook-associated protein3e-1584
NC_015391:2059191:2096860209686020982781419Carnobacterium sp. 17-4 chromosome, complete genomeflagellar hook-associated protein FlgK6e-1583.2
NC_010424:1857062:1879122187912218807201599Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar hook-associated protein FlgK2e-1481.6
NC_013891:640784:6469146469146484371524Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar hook-associated protein 1-related protein3e-1480.9
NC_016935:75186:1011851011851027921608Paenibacillus mucilaginosus 3016 chromosome, complete genomeflagellar hook-associated protein FlgK4e-1480.5
NC_016011:678419:6916526916526931751524Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar hook-associated protein FlgK8e-1479.3
NC_015690:75223:1012151012151027591545Paenibacillus mucilaginosus KNP414 chromosome, complete genomeflagellar hook-associated protein FlgK1e-1379
NC_003210:721824:7381917381917397111521Listeria monocytogenes EGD-e, complete genomeflagellar hook-associated protein1e-1378.6
NC_014387:605711:6124016124016140741674Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar hook-associated protein FlgK11e-1378.6
NC_013766:757987:7757147757147772341521Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar hook-associated protein FlgK1e-1378.6
NC_013768:721897:7424187424187439381521Listeria monocytogenes 08-5923, complete genomeflagellar hook-associated protein FlgK1e-1378.6
NC_006177:3192500:3201687320168732033631677Symbiobacterium thermophilum IAM 14863, complete genomeflagellar hook-associated protein2e-1378.2
NC_003212:721112:7374727374727389921521Listeria innocua Clip11262, complete genomeflagellar hook-associated protein4e-1377.4
NC_011660:1889504:1905539190553919070591521Listeria monocytogenes HCC23 chromosome, complete genomeflagellar hook-associated protein FlgK4e-1377
NC_000921:1147394:1164224116422411660441821Helicobacter pylori J99, complete genomeflagellar hook-associated protein4e-1377
NC_008555:696217:7023777023777038971521Listeria welshimeri serovar 6b str. SLCC5334, complete genomeflagellar hook-associated protein 1-related protein6e-1376.6
NC_002973:730942:7526837526837542031521Listeria monocytogenes str. 4b F2365, complete genomeflagellar hook-associated protein8e-1376.3
NC_012488:732233:7466757466757481951521Listeria monocytogenes Clip81459, complete genomeflagellar hook-associated protein FlgK1e-1275.9
NC_013093:2599591:2612790261279026141691380Actinosynnema mirum DSM 43827, complete genomeflagellar hook-associated protein FlgK7e-1272.8
NC_015186:132567:1513661513661528231458Acidiphilium multivorum AIU301, complete genomeflagellar hook-associated protein4e-1170.5
NC_013855:670285:6826586826586840671410Azospirillum sp. B510 plasmid pAB510a, complete sequenceflagellar hook-associated protein 17e-1169.7
NC_012914:6583000:6604508660450866060641557Paenibacillus sp. JDR-2, complete genomeflagellar hook-associated protein FlgK2e-1068.2
NC_019896:577594:5852315852315867541524Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar hook-associated protein3e-1067.8
NC_017195:3426000:3437164343716434386871524Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar hook-associated protein FlgK3e-1067.8
NC_009664:570768:5840195840195854671449Kineococcus radiotolerans SRS30216, complete genomeflagellar hook-associated protein FlgK6e-1066.6
NC_015589:1240197:1244260124426012456901431Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar hook-associated protein FlgK3e-0860.8
NC_008435:854576:8682628682628700311770Rhodopseudomonas palustris BisA53, complete genomeflagellar hook-associated protein FlgK3e-0860.8
NC_014032:3330596:3348315334831533497121398Salinibacter ruber M8 chromosome, complete genomeflagellar hook associated protein 18e-0859.3