Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3109790 Pseudomonas mendocina ymp, complete genome

Start: 3109790, End: 3111253, Length: 1464

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:1845370:1851738185173818531681431Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar capping protein FliD2e-110400
NC_009434:2006500:2013014201301420143691356Pseudomonas stutzeri A1501, complete genomeflagellar capping protein FliD3e-94345
NC_009092:1504363:1568033156803315694061374Shewanella loihica PV-4, complete genomeflagellar hook-associated 2 domain protein3e-63243
NC_016112:806256:8260168260168273651350Methylomicrobium alcaliphilum chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-60234
NC_015733:4253961:4262214426221442635691356Pseudomonas putida S16 chromosome, complete genomeflagellar cap protein FliD1e-57224
NC_016745:2913712:2927813292781329291981386Oceanimonas sp. GK1 chromosome, complete genomeputative flagellar hook-associated protein 23e-57223
NC_008340:774206:7847457847457861781434Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar hook-associated 2 domain protein4e-56219
NC_016616:1861852:1871205187120518725421338Dechlorosoma suillum PS chromosome, complete genomeflagellar capping protein2e-47190
NC_015424:1603000:1613923161392316153231401Aeromonas veronii B565 chromosome, complete genomeflagellar hook-associated protein 25e-43175
NC_011740:1189455:1209416120941612108221407Escherichia fergusonii ATCC 35469, complete genomeflagellar filament capping protein1e-40167
NC_009348:381752:3876633876633889461284Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafB2e-40167
NC_014837:2586870:2592215259221525936511437Pantoea sp. At-9b chromosome, complete genomeflagellar hook-associated 2 domain-containing protein9e-40165
NC_015276:3669263:3681148368114836825391392Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-39164
NC_015731:990000:1000654100065410026271974Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein5e-39162
NC_013851:2211120:2235895223589522379402046Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar hook-associated 2 domain protein3e-38160
NC_007517:480303:4883844883844898471464Geobacter metallireducens GS-15, complete genomeFlagellar hook-associated protein 2-like5e-38159
NC_014562:1844268:1844268184426818456891422Pantoea vagans C9-1 chromosome, complete genomeFlagellar hook-associated protein 25e-38159
NC_015968:2845751:2850133285013328515691437Enterobacter asburiae LF7a chromosome, complete genomeflagellar hook-associated 2 domain-containing protein5e-37155
NC_014121:1357339:1373644137364413750951452Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeflagellar hook-associated 2 domain-containing protein2e-36154
NC_016816:1912366:1929663192966319310601398Pantoea ananatis LMG 5342, complete genomeflagellar hook-associated protein 2 FliD1e-36154
NC_008570:1852286:1861893186189318633021410Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar hook-associated protein 25e-36152
NC_008800:2695977:2720258272025827216581401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar capping protein3e-35150
NC_015224:2017781:2032109203210920335091401Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar capping protein4e-35149
NC_009348:2836969:2844086284408628454801395Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar hook-associated protein 25e-35149
NC_009778:1222273:1247414124741412488441431Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-35148
NC_020260:1293860:1324026132402613254561431Cronobacter sakazakii Sp291, complete genomeflagellar hook-associated 2 domain-containing protein7e-35148
NC_014117:3375796:3395984339598433975551572Burkholderia sp. CCGE1002 chromosome chromosome 1, completeflagellar hook-associated 2 domain protein4e-34146
NC_008740:2905990:2908877290887729108501974Marinobacter aquaeolei VT8, complete genomeflagellar hook-associated 2 domain protein2e-33143
NC_012880:1765920:1818823181882318203221500Dickeya dadantii Ech703, complete genomeflagellar hook-associated 2 domain protein4e-33142
NC_016514:2950860:2971563297156329729811419Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar hook-associated protein 25e-32139
NC_020304:3447847:3449225344922534506611437Desulfocapsa sulfexigens DSM 10523, complete genomeflagellar capping protein8e-32138
NC_007503:861668:8729538729538743831431Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar hook-associated protein 24e-30133
NC_015563:606783:6230516230516244421392Delftia sp. Cs1-4 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein6e-30132
NC_012917:2921932:2940871294087129422951425Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar hook-associated 2 domain protein1e-27124
NC_015138:4905935:4909135490913549105711437Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar hook-associated 2 domain-containing protein2e-26120
NC_012559:2563922:2572412257241225736831272Laribacter hongkongensis HLHK9, complete genomeflagellar hook-associated 2 domain protein6e-26119
NC_015422:4395388:4395388439538843968331446Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-25118
NC_014910:4026613:4027120402712040285651446Alicycliphilus denitrificans BC chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-25118
NC_004547:1970686:1974065197406519754831419Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar hook-associated protein1e-25118
NC_014032:3330596:3337594333759433390751482Salinibacter ruber M8 chromosome, complete genomeA-type flagellar hook-associated protein 21e-25117
NC_015850:1497998:1515163151516315170971935Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar hook-associated protein fliD4e-25116
NC_015966:2337833:2367720236772023692221503Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein4e-25116
NC_011899:1807365:1824578182457818259241347Halothermothrix orenii H 168, complete genomeflagellar hook-associated 2 domain protein2e-24114
NC_009138:1843998:1887624188762418896121989Herminiimonas arsenicoxydans, complete genomeputative FLAGELLAR HOOK-ASSOCIATED PROTEIN 2 (FILAMENT CAP PROTEIN)2e-24114
NC_010718:2337209:2363298236329823647611464Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar hook-associated 2 domain protein1e-24114
NC_009831:66518:6651866518678941377Shewanella sediminis HAW-EB3, complete genomeflagellar hook-associated 2 domain protein2e-22107
NC_013592:1730505:1735779173577917372331455Dickeya dadantii Ech586, complete genomeflagellar hook-associated 2 domain protein8e-22105
NC_010002:661696:6839956839956854161422Delftia acidovorans SPH-1, complete genomeflagellar hook-associated 2 domain protein3e-21103
NC_008435:854576:8738608738608755631704Rhodopseudomonas palustris BisA53, complete genomeflagellar hook-associated 2 domain protein2e-20100
NC_007575:192095:2073992073992087871389Sulfurimonas denitrificans DSM 1251, complete genomeflagellar hook-associated protein 2-like1e-1997.8
NC_005085:4157257:4177765417776541791351371Chromobacterium violaceum ATCC 12472, complete genomeprobable flagellar protein6e-1995.9
NC_015391:2059191:2092001209200120934911491Carnobacterium sp. 17-4 chromosome, complete genomeflagellar hook-associated protein 26e-1995.9
NC_014500:3023762:3048711304871130501651455Dickeya dadantii 3937 chromosome, complete genomeflagellar hook-associated protein fliD9e-1995.5
NC_013205:2610956:2643487264348726450311545Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,flagellar hook-associated 2 domain protein1e-1895.1
NC_014650:376070:3998783998784014491572Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein8e-1789
NC_007644:779376:8020318020318039291899Moorella thermoacetica ATCC 39073, complete genomeFlagellar hook-associated 2-like1e-1688.6
NC_004193:2553630:2559639255963925611201482Oceanobacillus iheyensis HTE831, complete genomeflagellar hook-associated protein 21e-1688.6
NC_006177:3192500:3198980319898032004101431Symbiobacterium thermophilum IAM 14863, complete genomeflagellar hook-associated protein9e-1788.6
NC_019896:577594:5905905905905920861497Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein Cap3e-1687
NC_015660:391627:4112594112594128301572Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar hook-associated 2 domain-containing protein4e-1686.7
NC_013223:724394:7597497597497611521404Desulfohalobium retbaense DSM 5692, complete genomeflagellar hook-associated 2 domain protein4e-1686.3
NC_019978:2260395:2270160227016022719111752Halobacteroides halobius DSM 5150, complete genomeflagellar capping protein9e-1685.5
NC_017195:3426000:3431830343183034333261497Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar hook-associated protein 21e-1585.1
NC_009454:2201987:2202923220292322044791557Pelotomaculum thermopropionicum SI, complete genomeflagellar capping protein3e-1583.6
NC_012912:1788308:1794802179480217962231422Dickeya zeae Ech1591, complete genomeflagellar hook-associated 2 domain protein8e-1479
NC_013093:2599591:2608022260802226093141293Actinosynnema mirum DSM 43827, complete genomeflagellar hook-associated 2 domain protein7e-1375.5
NC_015714:943178:9443339443339465012169Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar hook-associated protein FliD1e-1275.1
NC_000919:948287:9494429494429516102169Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar hook-associated protein1e-1275.1
NC_016842:949899:9510549510549532222169Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeflagellar hook-associated protein FliD1e-1275.1
NC_016843:950000:9511629511629533302169Treponema pallidum subsp. pertenue str. Gauthier chromosome,flagellar hook-associated protein FliD1e-1275.1
NC_016844:950231:9513869513869535542169Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar hook-associated protein FliD1e-1275.1
NC_016848:950353:9515089515089536762169Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeflagellar hook-associated protein FliD1e-1275.1
NC_017268:949543:9506989506989528662169Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar hook-associated protein 21e-1275.1
NC_010741:949732:9508879508879530552169Treponema pallidum subsp. pallidum SS14, complete genomeflagellar filament cap protein1e-1275.1
NC_021508:949769:9509249509249530922169Treponema pallidum subsp. pallidum SS14, complete genomeflagellar hook-associated protein FliD1e-1275.1
NC_012914:6583000:6590018659001865917961779Paenibacillus sp. JDR-2, complete genomeflagellar hook-associated 2 domain protein3e-1273.6
NC_014378:261064:2641852641852659301746Acetohalobium arabaticum DSM 5501 chromosome, complete genomeflagellar hook-associated 2 domain protein3e-1170.5
NC_006510:3133965:3135321313532131368231503Geobacillus kaustophilus HTA426, complete genomeflagellar hook-associated protein3e-1067
NC_016641:945284:9490099490099504811473Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar capping protein8e-1065.9
NC_012491:5628000:5634609563460956361201512Brevibacillus brevis NBRC 100599, complete genomeflagellar hook-associated protein 23e-0963.9
NC_020291:4944835:4985389498538949869301542Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-associated protein 25e-0963.2
NC_009664:570768:5782375782375798081572Kineococcus radiotolerans SRS30216, complete genomeflagellar hook-associated 2 domain protein5e-0962.8
NC_020210:3169258:3169840316984031713451506Geobacillus sp. GHH01, complete genomeflagellar hook-associated protein II7e-0962.4
NC_007759:1356439:1380533138053313836403108Syntrophus aciditrophicus SB, complete genomeflagellar hook and flagellar capping protein1e-0862
NC_014387:605711:6217866217866233301545Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar hook-associated protein FliD12e-0860.8
NC_013411:3251500:3251509325150932530111503Geobacillus sp. Y412MC61, complete genomeflagellar hook-associated 2 domain protein6e-0859.3
NC_002973:730942:7551297551297563911263Listeria monocytogenes str. 4b F2365, complete genomeflagellar hook-associated protein1e-0758.5
NC_012488:732233:7490947490947503831290Listeria monocytogenes Clip81459, complete genomeflagellar capping protein1e-0758.2
NC_003210:721824:7406107406107418991290Listeria monocytogenes EGD-e, complete genomeflagellar hook-associated protein1e-0758.2
NC_013768:721897:7448377448377461261290Listeria monocytogenes 08-5923, complete genomeflagellar capping protein2e-0758.2
NC_013766:757987:7781337781337794221290Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar capping protein2e-0758.2
NC_008555:696217:7047967047967060851290Listeria welshimeri serovar 6b str. SLCC5334, complete genomeflagellar hook-associated protein 22e-0757.8
NC_003212:721112:7398917398917411801290Listeria innocua Clip11262, complete genomeflagellar hook-associated protein3e-0757
NC_011830:4399642:4409276440927644108081533Desulfitobacterium hafniense DCB-2, complete genomeflagellar hook-associated 2 domain protein4e-0756.6
NC_012108:4118888:4145160414516041468931734Desulfobacterium autotrophicum HRM2, complete genomeFliD1e-0655.5
NC_011660:1889504:1903351190335119046401290Listeria monocytogenes HCC23 chromosome, complete genomeflagellar capping protein1e-0654.7
NC_016011:678419:6940746940746953631290Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar hook-associated protein 2 FliD2e-0654.7
NC_013891:640784:6493366493366506251290Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar hook-associated protein 22e-0654.3
NC_010337:748467:7667547667547683341581Heliobacterium modesticaldum Ice1, complete genomeflagellar hook-associated protein 23e-0653.5