Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:2427120:2470166 Pseudomonas mendocina ymp, complete genome

Start: 2470166, End: 2470846, Length: 681

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:3520500:354185635418563542557702Marinobacter aquaeolei VT8, complete genomeputative (L31491) ORF2; putative (plasmid pTOM9)2e-45182
NC_015379:2751342:276561927656192766257639Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-45181
NC_011992:1912200:192139719213971922083687Acidovorax ebreus TPSY, complete genomeputative (L31491) ORF2; putative (plasmid pTOM9)3e-23108
NC_010943:9294:329993299933637639Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane anchor protein9e-23107
NC_007645:3870466:387046638704663871062597Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-22106
NC_011138:318168:328696328696329208513Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein8e-1684
NC_016616:1182125:118603711860371186678642Dechlorosoma suillum PS chromosome, complete genomehypothetical protein5e-1374.3