Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:2427120:2469164 Pseudomonas mendocina ymp, complete genome

Start: 2469164, End: 2469550, Length: 387

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015554:3964000:396719339671933967630438Alteromonas sp. SN2 chromosome, complete genomehypothetical protein9e-1475.5
NC_014032:269844:285581285581286039459Salinibacter ruber M8 chromosome, complete genomehypothetical protein5e-1063.2
NC_013422:1755875:177227717722771772777501Halothiobacillus neapolitanus c2, complete genomehypothetical protein8e-1062.4
NC_007677:241846:252563252563253021459Salinibacter ruber DSM 13855, complete genomehypothetical protein1e-0962
NC_009349:3396:614461446614471Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completehypothetical protein4e-0753.5