Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2459480 Pseudomonas mendocina ymp, complete genome

Start: 2459480, End: 2460685, Length: 1206

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:4992500:4996740499674049979451206Escherichia coli UMN026 chromosome, complete genomeputative chromate ion transporter4e-155547
NC_015422:1694363:1694363169436316955921230Alicycliphilus denitrificans K601 chromosome, complete genomechromate transporter7e-97354
NC_015723:1347946:1349846134984613510751230Cupriavidus necator N-1 chromosome 2, complete sequencechromate transport protein ChrA9e-97353
NC_007645:2922190:2924318292431829255291212Hahella chejuensis KCTC 2396, complete genomeChromate transport protein ChrA4e-92338
NC_007964:2152000:2154867215486721561591293Nitrobacter hamburgensis X14, complete genomeChromate transporter9e-89327
NC_011071:2207385:2219739221973922209411203Stenotrophomonas maltophilia R551-3, complete genomechromate transporter, chromate ion transporter (CHR) family1e-86320
NC_003909:4854379:4901234490123449024151182Bacillus cereus ATCC 10987, complete genomechromate ion transporter1e-85317
NC_009767:2866668:2889069288906928902741206Roseiflexus castenholzii DSM 13941, complete genomechromate transporter, chromate ion transporter (CHR) family6e-84311
NC_010511:1122529:1139640113964011408361197Methylobacterium sp. 4-46 chromosome, complete genomechromate transporter1e-71270
NC_016613:2759908:2767626276762627687651140Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein8e-59228
NC_011184:597496:6145146145146156651152Vibrio fischeri MJ11 chromosome I, complete sequencechromate transport protein1e-58227
NC_014973:595153:5985025985025996561155Geobacter sp. M18 chromosome, complete genomechromate transporter, chromate ion transporter (CHR) family8e-27121
NC_013526:835117:8488288488288499881161Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomechromate transporter, chromate ion transporter (CHR) family3e-25116
NC_013156:980888:1003784100378410049471164Methanocaldococcus fervens AG86, complete genomechromate transporter, chromate ion transporter (CHR) family5e-2099.4
NC_007952:3283394:330698433069843307724741Burkholderia xenovorans LB400 chromosome 2, complete sequence2e-1997.4
NC_016609:7819243:7824456782445678257301275Niastella koreensis GR20-10 chromosome, complete genomechromate ion transporter family chromate transporter5e-1995.5
NC_009441:3522519:3542235354223535433651131Flavobacterium johnsoniae UW101 chromosome, complete genomechromate transporter5e-1582.8
NC_015222:1843093:1857350185735018587171368Nitrosomonas sp. AL212 chromosome, complete genomechromate transporter, chromate ion transporter (CHR) family5e-1582.4
NC_011992:1912200:1919307191930719205091203Acidovorax ebreus TPSY, complete genomechromate transporter, chromate ion transporter (CHR) family2e-1480.5
NC_008687:302450:3141483141483155121365Paracoccus denitrificans PD1222 chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family3e-1480.1
NC_008740:3520500:3536799353679935382501452Marinobacter aquaeolei VT8, complete genomechromate transporter, chromate ion transporter (CHR) family1e-1377.8
NC_008391:2045348:2071616207161620727941179Burkholderia cepacia AMMD chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family4e-1376.3
NC_009256:1782000:1797616179761617988031188Burkholderia vietnamiensis G4 chromosome 1, complete sequencechromate transporter4e-1376.3
NC_009254:637952:6721886721886733751188Burkholderia vietnamiensis G4 chromosome 3, complete sequencechromate transporter4e-1376.3
NC_008268:3233961:3251744325174432531471404Rhodococcus sp. RHA1, complete genomeprobable chromate transporter, chromate ion transporter family4e-1376.3
NC_010552:58294:9866098660998381179Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family7e-1375.5
NC_009659:3384997:3413690341369034150631374Janthinobacterium sp. Marseille chromosome, complete genomechromate transport protein chrA6e-1272.4
NC_008212:1347000:1356235135623513575931359Haloquadratum walsbyi DSM 16790, complete genomechromate transport protein3e-1170.1
NC_016616:1182125:1190260119026011916241365Dechlorosoma suillum PS chromosome, complete genomecchromate ion transporter3e-1169.7
NC_003296:673790:6975766975766987811206Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE CHROMATE TRANSPORT TRANSMEMBRANE PROTEIN2e-1067.8
NC_008060:476861:503684503684504295612Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceChromate transporter2e-1067
NC_008542:1021848:104833110483311048942612Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceChromate transporter2e-1067
NC_009439:2427120:2475278247527824766391362Pseudomonas mendocina ymp, complete genomechromate transporter2e-1067
NC_010508:981377:100158710015871002198612Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceChromate transporter3e-1066.6
NC_018080:3088866:3089186308918630904361251Pseudomonas aeruginosa DK2 chromosome, complete genomechromate resistance protein3e-1066.6
NC_013315:3689422:369635836963583696885528Clostridium difficile CD196 chromosome, complete genomechromate transport protein5e-1065.9
NC_009439:4734237:4740488474048847418221335Pseudomonas mendocina ymp, complete genomechromate transporter5e-1065.9
NC_015138:765497:7934167934167947651350Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completechromate transporter, chromate ion transporter (CHR) family6e-1065.9
NC_016830:4639388:4639388463938846407461359Pseudomonas fluorescens F113 chromosome, complete genomeChrA protein7e-1065.5
NC_018515:937994:938902938902939429528Desulfosporosinus meridiei DSM 13257 chromosome, complete genomechromate transport protein ChrA2e-0963.5
NC_010718:237962:239828239828240346519Natranaerobius thermophilus JW/NM-WN-LF, complete genomeChromate transporter9e-0961.6
NC_014364:1116439:113598311359831136543561Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeChromate transporter1e-0861.2
NC_015519:2580310:260117626011762601718543Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter1e-0861.2
NC_006347:3760447:378591037859103786452543Bacteroides fragilis YCH46, complete genomechromate transport protein2e-0860.8
NC_003228:3690596:369461636946163695158543Bacteroides fragilis NCTC 9343, complete genomeputative chromate transport protein2e-0860.8
NC_016776:3714642:374010737401073740649543Bacteroides fragilis 638R, complete genomeputative chromate transport protein2e-0860.8
NC_014733:1073540:1089863108986310912241362Methylovorus sp. MP688 chromosome, complete genomechromate transporter, chromate ion transporter (chr) family3e-0860.1
NC_008262:2433979:244788324478832448434552Clostridium perfringens SM101, complete genomechromate transport protein5e-0859.3
NC_008261:2770468:278438627843862784937552Clostridium perfringens ATCC 13124, complete genomechromate transport protein6e-0858.9
NC_015510:2209663:2225082222508222264221341Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomechromate transporter9e-0858.5
NC_014633:655693:669265669265669831567Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencechromate transporter8e-0858.5
NC_014209:2257316:226440922644092264999591Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Chromate transporter1e-0758.2
NC_014479:3510972:351097235109723511508537Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative anion transporter2e-0757.8
NC_016012:16134:340193401934564546Candidatus Arthromitus sp. SFB-rat-Yit, complete genomechromate transport protein2e-0757.8
NC_014831:866614:879221879221879760540Thermaerobacter marianensis DSM 12885 chromosome, complete genomeChromate transporter2e-0757.4
NC_008343:823093:824110824110824703594Granulibacter bethesdensis CGDNIH1, complete genomechromate transport protein2e-0757.4
NC_020272:430500:446013446013446549537Bacillus amyloliquefaciens IT-45, complete genomechromate transporter2e-0757.4
NC_020410:3440327:344484834448483445384537Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative anion transporter2e-0757.4
NC_010511:6756000:6777485677748567788851401Methylobacterium sp. 4-46 chromosome, complete genomechromate transporter2e-0757
NC_013921:2375900:238247623824762382994519Thermoanaerobacter italicus Ab9 chromosome, complete genomeChromate transporter2e-0757
NC_013921:2375900:238299123829912383581591Thermoanaerobacter italicus Ab9 chromosome, complete genomeChromate transporter2e-0757
NC_014551:3515462:352033535203353520871537Bacillus amyloliquefaciens DSM 7, complete genomeanion transporter2e-0757
NC_017188:3482500:348751034875103488046537Bacillus amyloliquefaciens TA208 chromosome, complete genomechromate transporter2e-0757
NC_006347:3760447:378647837864783787026549Bacteroides fragilis YCH46, complete genomechromate transport protein5e-0756.2
NC_003228:3690596:369518436951843695732549Bacteroides fragilis NCTC 9343, complete genomeputative hromate transport membrane protein4e-0756.2
NC_016776:3714642:374067537406753741223549Bacteroides fragilis 638R, complete genomeputative chromate transport membrane protein4e-0756.2
NC_015519:2580310:259719725971972597790594Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter4e-0756.2
NC_009725:3447336:345196434519643452500537Bacillus amyloliquefaciens FZB42, complete genomeYwrA4e-0756.2
NC_016109:7631165:7651947765194776532751329Kitasatospora setae KM-6054, complete genomeputative chromate transporter5e-0755.8
NC_018515:937994:939514939514940059546Desulfosporosinus meridiei DSM 13257 chromosome, complete genomechromate transport protein ChrA6e-0755.8
NC_016077:1876119:187715118771511877774624Acidaminococcus intestini RyC-MR95 chromosome, complete genomechromate transporter6e-0755.8
NC_009256:1782000:1800135180013518015531419Burkholderia vietnamiensis G4 chromosome 1, complete sequencechromate transporter7e-0755.5
NC_009254:637952:6747016747016761251425Burkholderia vietnamiensis G4 chromosome 3, complete sequencechromate transporter7e-0755.5
NC_020272:430500:446546446546447136591Bacillus amyloliquefaciens IT-45, complete genomeputative transporter ywrB7e-0755.5
NC_014209:2257316:226389422638942264412519Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Chromate transporter7e-0755.5
NC_020410:3440327:344426134442613444851591Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative anion transporter1e-0654.7
NC_010320:2397395:240479824047982405337540Thermoanaerobacter sp. X514 chromosome, complete genomechromate transporter2e-0654.3
NC_017191:3483231:348919434891943489709516Bacillus amyloliquefaciens XH7 chromosome, complete genomeanion transporter2e-0654.3
NC_017190:3528229:353435335343533534868516Bacillus amyloliquefaciens LL3 chromosome, complete genomeanion transporter1e-0654.3
NC_014538:2396559:240396224039622404546585Thermoanaerobacter sp. X513 chromosome, complete genomeChromate transporter2e-0653.9
NC_010321:2319820:232400223240022324541540Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromate transporter2e-0653.9
NC_014964:2301835:230601723060172306601585Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeChromate transporter2e-0653.9
NC_014551:3515462:351974835197483520338591Bacillus amyloliquefaciens DSM 7, complete genomeanion transporter3e-0653.5
NC_017188:3482500:348692334869233487513591Bacillus amyloliquefaciens TA208 chromosome, complete genomeanion transporter3e-0653.5
NC_017190:3528229:353374535337453534335591Bacillus amyloliquefaciens LL3 chromosome, complete genomeanion transporter3e-0653.5
NC_017191:3483231:348858634885863489176591Bacillus amyloliquefaciens XH7 chromosome, complete genomechromate transporter3e-0653.5
NC_013315:3689422:369585836958583696370513Clostridium difficile CD196 chromosome, complete genomechromate transport protein3e-0653.5
NC_014964:2301835:230550223055022306020519Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeChromate transporter4e-0653.1
NC_010321:2319820:232348723234872324005519Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromate transporter4e-0653.1
NC_010084:988908:1010703101070310119051203Burkholderia multivorans ATCC 17616 chromosome 1, completechromate transporter4e-0653.1
NC_010002:3357752:3378328337832833796861359Delftia acidovorans SPH-1, complete genomechromate transporter, chromate ion transporter (CHR) family3e-0653.1
NC_014538:2396559:240344724034472403965519Thermoanaerobacter sp. X513 chromosome, complete genomeChromate transporter3e-0653.1
NC_010320:2397395:240428324042832404801519Thermoanaerobacter sp. X514 chromosome, complete genomechromate transporter3e-0653.1
NC_009725:3447336:345137734513773451967591Bacillus amyloliquefaciens FZB42, complete genomeYwrB4e-0652.8
NC_015519:2580310:259778725977872598362576Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter5e-0652.4
NC_016012:16134:334823348234018537Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeputative chromate transporter6e-0652.4
NC_014479:3510972:351038235103823510975594Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative anion transporter8e-0652
NC_012527:288207:2908652908652922591395Deinococcus deserti VCD115 plasmid 1, complete sequencechromate transport; membrane protein1e-0551.6