Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2456469 Pseudomonas mendocina ymp, complete genome

Start: 2456469, End: 2457305, Length: 837

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2698572:273960627396062740442837Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein3e-161567
NC_007508:3865000:388851638885163889445930Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein8e-71266
NC_017030:3017802:301780230178023018650849Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-64246
NC_014623:7045822:706034270603427061187846Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-62237
NC_006350:1938631:196957119695711970482912Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein2e-53209
NC_015850:1060000:107116010711601072044885Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-52206
NC_020911:1549065:157643315764331577293861Octadecabacter antarcticus 307, complete genomehypothetical protein DUF6929e-52203
NC_008820:1818695:182499518249951825873879Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-49194
NC_012913:1041969:105766910576691058589921Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein3e-46185
NC_014618:57707:666656666567495831Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein7e-46184
NC_007513:1311957:134157213415721342459888Synechococcus sp. CC9902, complete genomehypothetical protein8e-46184
NC_010524:2761394:276225427622542763183930Leptothrix cholodnii SP-6, complete genomeprotein of unknown function DUF6921e-42173
NC_017516:2220000:222377622237762224618843Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein1e-41170
NC_009481:1190301:120440912044091205296888Synechococcus sp. WH 7803 chromosome, complete genomehypothetical protein1e-41170
NC_002946:1902642:192009819200981920940843Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein9e-42170
NC_011035:1908000:191164419116441912510867Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein9e-42170
NC_017511:1812000:181548718154871816353867Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein9e-42170
NC_008767:2160000:216381421638142164680867Neisseria meningitidis FAM18, complete genomehypothetical protein2e-41169
NC_017512:2209000:221026422102642211106843Neisseria meningitidis WUE 2594, complete genomehypothetical protein2e-41169
NC_020126:5849483:584948358494835850328846Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-35149
NC_016887:5988878:601007760100776010940864Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-33142
NC_006322:203932:215019215019215837819Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-29128
NC_006270:204000:215212215212216030819Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-29128
NC_016024:1876000:187737818773781878271894Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein2e-26119
NC_015850:1947000:195678719567871957227441Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-1376.6
NC_015850:548821:558738558738559178441Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-1376.6
NC_010162:193536:194309194309195211903Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1375.9
NC_009075:15017:375783757838429852Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein4e-1375.5