Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2451414 Pseudomonas mendocina ymp, complete genome

Start: 2451414, End: 2452256, Length: 843

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:3611738:365469436546943655344651Pseudomonas stutzeri A1501, complete genomecytochrome c family protein3e-91335
NC_002947:6123608:612964061296406130422783Pseudomonas putida KT2440, complete genomecytochrome c family protein1e-89329
NC_010501:5735656:574156457415645742346783Pseudomonas putida W619, complete genomehypothetical protein3e-89328
NC_015733:5955467:596331259633125964094783Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-88326
NC_010322:1:153971539716176780Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein4e-85314
NC_009512:1:146151461515394780Pseudomonas putida F1, complete genomehypothetical protein4e-85314
NC_010501:1:146351463515414780Pseudomonas putida W619, complete genomehypothetical protein4e-85314
NC_017986:3283433:329094732909473291720774Pseudomonas putida ND6 chromosome, complete genomehypothetical protein9e-84310
NC_010943:2465976:247252224725222473292771Stenotrophomonas maltophilia K279a, complete genomeputative cytochrome c family protein1e-53209
NC_016616:1091606:110321111032111103885675Dechlorosoma suillum PS chromosome, complete genomecytochrome C1e-37156
NC_018697:1343756:136737313673731367927555Cycloclasticus sp. P1 chromosome, complete genomeCytochrome c family protein4e-35148
NC_016616:2768053:279206827920682792730663Dechlorosoma suillum PS chromosome, complete genomecytochrome C5e-35148
NC_018868:619113:633021633021633611591Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomecytochrome c family protein9e-33140
NC_014315:1463383:1474188147418814753361149Nitrosococcus watsoni C-113 chromosome, complete genomecytochrome c class I1e-22106
NC_007484:1975322:1985057198505719862051149Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c, class I2e-22106
NC_008009:5139896:515901951590195159573555Acidobacteria bacterium Ellin345, complete genomehypothetical protein2e-1066.6
NC_014355:665000:665456665456666073618Candidatus Nitrospira defluvii, complete genomeputative cytochrome c6e-0858.5