Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2356929 Pseudomonas mendocina ymp, complete genome

Start: 2356929, End: 2357402, Length: 474

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2838132:283972628397262840172447Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein6e-76282
NC_018691:1293449:130518813051881305685498Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein1e-48191
NC_017186:7333732:734627273462727346775504Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein5e-38156
NC_014318:7333688:734622873462287346731504Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein5e-38156
NC_004603:1897532:189991118999111900192282Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein4e-2097.1
NC_009512:1025365:103465310346531035099447Pseudomonas putida F1, complete genomehypothetical protein6e-1993.2
NC_016111:2651500:265872926587292659271543Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-1063.5