Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:2038303:2067652 Pseudomonas mendocina ymp, complete genome

Start: 2067652, End: 2068239, Length: 588

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008639:2968000:299306729930672993639573Chlorobium phaeobacteroides DSM 266, complete genomeputative acetyltransferase7e-33140
NC_014640:6745873:676984867698486770432585Achromobacter xylosoxidans A8 chromosome, complete genometransferase hexapeptide family protein 54e-31134
NC_011060:514874:558478558478559071594Pelodictyon phaeoclathratiforme BU-1, complete genomeputative acetyltransferase4e-30130
NC_014931:5088125:509896350989635099544582Variovorax paradoxus EPS chromosome, complete genomeputative acetyltransferase5e-26117
NC_006138:23902:296802968030300621Desulfotalea psychrophila LSv54, complete genomepilin glycosylation protein1e-2099.4
NC_008700:2701500:271018927101892710767579Shewanella amazonensis SB2B, complete genomepilin glycosylation protein2e-2098.6
NC_005139:343500:371227371227371955729Vibrio vulnificus YJ016 chromosome I, complete sequenceputative acetyltransferase8e-1993.6
NC_018080:1834754:185937218593721860007636Pseudomonas aeruginosa DK2 chromosome, complete genomeTrimeric LpxA-like family protein2e-1685.5
NC_013791:1291339:130136213013621301979618Bacillus pseudofirmus OF4 chromosome, complete genomeacetyltransferase4e-1684.3
NC_018691:1822731:184309818430981843640543Alcanivorax dieselolei B5 chromosome, complete genomeSugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family1e-1582.8
NC_014313:165490:183653183653184276624Hyphomicrobium denitrificans ATCC 51888 chromosome, completesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family2e-1582
NC_007954:3171081:317886531788653179506642Shewanella denitrificans OS217, complete genomeputative acetyltransferase8e-1580.1
NC_011145:4960940:496485349648534965476624Anaeromyxobacter sp. K, complete genomepilin glycosylation protein3e-1478.2
NC_008260:1015447:103513210351321035758627Alcanivorax borkumensis SK2, complete genomeacyl-[acyl-carrier-protein]--UDP-N-acetylglucosa mine O-acylt2e-1375.9
NC_014206:3468500:347082834708283471460633Geobacillus sp. C56-T3 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family3e-1375.1
NC_016593:3402205:341881234188123419444633Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD5e-1374.3
NC_007517:2632233:264067626406762641338663Geobacter metallireducens GS-15, complete genometransferase hexapeptide repeat protein5e-1374.3
NC_007575:601256:602407602407602982576Sulfurimonas denitrificans DSM 1251, complete genomeacetyl transferase6e-1373.9
NC_015186:347346:367246367246367890645Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-1273.2
NC_009484:318500:335990335990336634645Acidiphilium cryptum JF-5 chromosome, complete genomecarbonic anhydrase1e-1273.2
NC_014974:246404:259975259975260607633Thermus scotoductus SA-01 chromosome, complete genomeacetyltransferase with multiple hexapeptide repeat domains3e-1271.6
NC_014973:1767798:176952217695221770160639Geobacter sp. M18 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family3e-1271.6
NC_011899:1807365:181500318150031815632630Halothermothrix orenii H 168, complete genometransferase hexapeptide repeat protein4e-1271.2
NC_011891:4931961:493585949358594936443585Anaeromyxobacter dehalogenans 2CP-1, complete genomepilin glycosylation protein4e-1271.2
NC_007955:1664998:166719916671991667837639Methanococcoides burtonii DSM 6242, complete genometransferase hexapeptide repeat6e-1270.5
NC_007347:1215358:122313812231381223809672Ralstonia eutropha JMP134 chromosome 1, complete sequencetransferase hexapeptide repeat2e-1169.3
NC_010336:1248071:127161312716131272194582Francisella philomiragia subsp. philomiragia ATCC 25017, completeacetyl transferase3e-1168.6
NC_007973:2952004:296108129610812961626546Ralstonia metallidurans CH34 chromosome 1, complete sequenceputative acetyltransferase4e-1167.8
NC_009483:1936486:196980819698081970443636Geobacter uraniireducens Rf4 chromosome, complete genomeSerine acetyltransferase-like protein5e-1167.4
NC_011831:2410607:244564724456472446336690Chloroflexus aggregans DSM 9485, complete genomehexapaptide repeat-containing transferase8e-1167
NC_014622:2477019:248231924823192482960642Paenibacillus polymyxa SC2 chromosome, complete genomeacetyltransferase1e-1066.2
NC_008570:3220539:325324632532463253863618Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeacetyltransferase2e-1065.9
NC_012881:4023895:404073040407304041350621Desulfovibrio salexigens DSM 2638, complete genometransferase hexapeptide repeat containing protein2e-1065.5
NC_002939:3303989:3314633331463333157481116Geobacter sulfurreducens PCA, complete genomehexapeptide transferase family protein2e-1065.5
NC_013410:3280039:332391033239103324428519Fibrobacter succinogenes subsp. succinogenes S85 chromosome,PglB protein3e-1065.1
NC_009699:2875386:289729728972972897935639Clostridium botulinum F str. Langeland chromosome, complete genomehexapeptide repeat-containing transferase4e-1064.3
NC_005363:1604337:163537616353761635957582Bdellovibrio bacteriovorus HD100, complete genomeputative acetyltransferase7e-1063.9
NC_015732:529201:553859553859554431573Spirochaeta caldaria DSM 7334 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family2e-0962.8
NC_016148:1877711:188324718832471883894648Thermovirga lienii DSM 17291 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family4e-0961.2
NC_007796:2387002:239974023997402400372633Methanospirillum hungatei JF-1, complete genometransferase hexapeptide repeat5e-0960.8
NC_011026:2533017:256673625667362567359624Chloroherpeton thalassium ATCC 35110, complete genometransferase hexapeptide repeat containing protein1e-0859.3
NC_014117:3375796:338566933856693386400732Burkholderia sp. CCGE1002 chromosome chromosome 1, completesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family2e-0858.9
NC_017187:641822:647410647410647985576Arcobacter butzleri ED-1, complete genomeacetyl transferase4e-0857.8
NC_009379:304222:305659305659306342684Polynucleobacter sp. QLW-P1DMWA-1, complete genometransferase hexapeptide repeat containing protein9e-0856.6
NC_014387:497883:548856548856549515660Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeacetyltransferase2e-0755.5
NC_005363:1604337:162101216210121621671660Bdellovibrio bacteriovorus HD100, complete genomehexapeptide transferase family protein2e-0755.5
NC_008593:980731:993300993300993938639Clostridium novyi NT, complete genomehexapeptide transferase family protein4e-0754.7
NC_011060:514874:516058516058516687630Pelodictyon phaeoclathratiforme BU-1, complete genometransferase hexapeptide repeat containing protein4e-0754.7
NC_005070:419261:451401451401452000600Synechococcus sp. WH 8102, complete genomeputative hexapeptide transferase family protein4e-0754.7
NC_012660:1804610:182800518280051828670666Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transferase4e-0754.7
NC_014006:2999500:301038230103823010969588Sphingobium japonicum UT26S chromosome 1, complete genomeputative acetyltransferase4e-0754.3
NC_010424:14657:329253292533578654Candidatus Desulforudis audaxviator MP104C, complete genometransferase hexapeptide repeat7e-0753.5
NC_016935:3994500:401458540145854015181597Paenibacillus mucilaginosus 3016 chromosome, complete genometransferase hexapeptide repeat containing protein1e-0653.1
NC_015690:3438288:345870934587093459305597Paenibacillus mucilaginosus KNP414 chromosome, complete genometransferase hexapeptide repeat containing protein1e-0653.1
NC_012491:5628000:564110956411095641741633Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0651.6
NC_014011:1760793:176745317674531768064612Aminobacterium colombiense DSM 12261 chromosome, complete genomesugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family3e-0651.6
NC_013202:1367447:138404213840421384659618Halomicrobium mukohataei DSM 12286, complete genomehexapaptide repeat-containing transferase5e-0650.8