Pre_GI: BLASTP Hits

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Query: NC_009439:1297851:1312255 Pseudomonas mendocina ymp, complete genome

Start: 1312255, End: 1313568, Length: 1314

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:2548720:2586629258662925879361308Pseudomonas putida ND6 chromosome, complete genomephosphate-selective porin O and P5e-174610
NC_010322:29983:5320953209545161308Pseudomonas putida GB-1 chromosome, complete genomephosphate-selective porin O and P5e-174610
NC_009512:27783:5242752427537341308Pseudomonas putida F1, complete genomephosphate-selective porin O and P5e-174610
NC_010501:30000:5714357143584501308Pseudomonas putida W619, complete genomephosphate-selective porin O and P5e-174610
NC_002947:8394:4046940469417581290Pseudomonas putida KT2440, complete genomeporin P6e-174610
NC_007484:2746078:2763761276376127651551395Nitrosococcus oceani ATCC 19707, complete genomePhosphate-selective porin O and P2e-30133
NC_007484:2746078:2765577276557727669861410Nitrosococcus oceani ATCC 19707, complete genomePhosphate-selective porin O and P1e-27124
NC_012982:1899973:1904430190443019055541125Hirschia baltica ATCC 49814, complete genomephosphate-selective porin O and P1e-0654.7