Pre_GI: BLASTP Hits

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Query: NC_009439:1297851:1311783 Pseudomonas mendocina ymp, complete genome

Start: 1311783, End: 1312130, Length: 348

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:8394:318773187732203327Pseudomonas putida KT2440, complete genomehypothetical protein4e-1166.6
NC_010322:29983:446354463544961327Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-1064.7
NC_010501:30000:485694856948895327Pseudomonas putida W619, complete genomehypothetical protein2e-1064.7
NC_009512:27783:438534385344179327Pseudomonas putida F1, complete genomehypothetical protein2e-1064.7
NC_017986:2548720:257805525780552578381327Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1064.3
NC_015733:5909821:593430759343075934633327Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-1063.5
NC_009512:27783:577035770358026324Pseudomonas putida F1, complete genomehypothetical protein6e-1062.8
NC_010501:30000:624196241962742324Pseudomonas putida W619, complete genomehypothetical protein6e-1062.8
NC_010322:29983:584855848558808324Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein6e-1062.8
NC_017986:2548720:259190225919022592225324Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-1062.8
NC_015733:5909821:593949659394965939819324Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-0959.7
NC_002947:8394:457274572745939213Pseudomonas putida KT2440, complete genomehypothetical protein2e-0858.2