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Query: NC_009438:3019552 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3019552, End: 3042802, Length: 23251

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009997:36610833661083368965128569Shewanella baltica OS195, complete genome01586BLASTN svgBLASTP svg
NC_009052:34670003467000348590918910Shewanella baltica OS155, complete genome4e-153549BLASTN svgBLASTP svg
NC_010334:17019571701957172731325357Shewanella halifaxensis HAW-EB4, complete genome6e-35157BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome6e-26127BLASTN svgBLASTP svg
NC_008700:27883632788363281549227130Shewanella amazonensis SB2B, complete genome2e-22115BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005139:178400017840001927839143840Vibrio vulnificus YJ016 chromosome I, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_004459:2443000*24430002588599145600Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_010634:2124185*2124185214874924565Yersinia pseudotuberculosis PB1/+, complete genome3e-0661.9BLASTN svgBLASTP svg