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Query: NC_009438:1282022 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 1282022, End: 1300714, Length: 18693

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008750:3435495*3435495345768522191Shewanella sp. W3-18-1, complete genome023270BLASTN svgBLASTP svg
NC_011566:3994239*3994239401970925471Shewanella piezotolerans WP3, complete genome4e-91343BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-19105BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome2e-19105BLASTN svgBLASTP svg
NC_012880:3241886*3241886326491123026Dickeya dadantii Ech703, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012912:12293331229333125280123469Dickeya zeae Ech1591, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_010694:30554033055403307880623404Erwinia tasmaniensis, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_010995:2547164*2547164256843021267Cellvibrio japonicus Ueda107, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome9e-0660BLASTN svgBLASTP svg
NC_008319:61513561513563513920005Synechococcus sp. CC9311, complete genome9e-0660BLASTN svgBLASTP svg