Pre_GI: BLASTP Hits

Some Help

Query: NC_009438:3019552:3021458 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3021458, End: 3021781, Length: 324

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:367064036706403670963324Shewanella baltica OS195, complete genomeanti-sigma-28 factor, FlgM7e-42169
NC_010334:1701957:172069117206911721005315Shewanella halifaxensis HAW-EB4, complete genomeanti-sigma-28 factor, FlgM6e-23105
NC_009092:1504363:155125015512501551567318Shewanella loihica PV-4, complete genomeanti-sigma-28 factor, FlgM1e-1891.7
NC_014541:2978500:298123729812372981557321Ferrimonas balearica DSM 9799 chromosome, complete genomeanti-sigma-28 factor, FlgM6e-1579.3