Pre_GI: BLASTP Hits

Some Help

Query: NC_009438:2939478:2958327 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 2958327, End: 2959316, Length: 990

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:3381943:340286334028633403840978Shewanella baltica OS155, complete genomelipopolysaccharide biosynthesis protein1e-150532
NC_008322:1595500:160209116020911603065975Shewanella sp. MR-7, complete genomelipopolysaccharide biosynthesis5e-149527
NC_008321:1523323:152653215265321527518987Shewanella sp. MR-4, complete genomelipopolysaccharide biosynthesis3e-148524
NC_011663:1709003:171697817169781717964987Shewanella baltica OS223 chromosome, complete genomelipopolysaccharide biosynthesis protein7e-142503
NC_008577:1579950:159167415916741592630957Shewanella sp. ANA-3 chromosome 1, complete sequencelipopolysaccharide biosynthesis4e-139494
NC_009665:3460906:348175934817593482733975Shewanella baltica OS185 chromosome, complete genomelipopolysaccharide biosynthesis protein4e-139494
NC_009997:3583166:360169236016923602654963Shewanella baltica OS195, complete genomelipopolysaccharide biosynthesis protein3e-138491
NC_016901:3530248:355013235501323551094963Shewanella baltica OS678 chromosome, complete genomelipopolysaccharide biosynthesis protein3e-138491
NC_010334:1783500:178683917868391787816978Shewanella halifaxensis HAW-EB4, complete genomelipopolysaccharide biosynthesis protein2e-125449
NC_010506:2046000:204947320494732050438966Shewanella woodyi ATCC 51908, complete genomelipopolysaccharide biosynthesis protein5e-123441
NC_009901:1693500:169804816980481699025978Shewanella pealeana ATCC 700345, complete genomelipopolysaccharide biosynthesis protein6e-123440
NC_009092:1599526:161260016126001613574975Shewanella loihica PV-4, complete genomelipopolysaccharide biosynthesis protein7e-123440
NC_014012:1676983:168038016803801681339960Shewanella violacea DSS12, complete genomechain length determinant protein2e-121435
NC_011566:1597751:160398016039801604936957Shewanella piezotolerans WP3, complete genomeLipopolysaccharide biosynthesis3e-120431
NC_007954:3171081:320071332007133201687975Shewanella denitrificans OS217, complete genomelipopolysaccharide biosynthesis1e-107389
NC_008700:2701500:272583927258392726822984Shewanella amazonensis SB2B, complete genomechain length determinant protein1e-106386
NC_014541:1165991:117383911738391174798960Ferrimonas balearica DSM 9799 chromosome, complete genomelipopolysaccharide biosynthesis protein4e-93341
NC_015497:1287877:131186113118611312859999Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomelipopolysaccharide biosynthesis protein6e-87320
NC_016613:221476:2260652260652270721008Vibrio sp. EJY3 chromosome 1, complete sequenceOtnB protein5e-81301
NC_004603:230000:233872233872234864993Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeOtnB protein5e-77288
NC_009654:866124:874844874844875791948Marinomonas sp. MWYL1, complete genomelipopolysaccharide biosynthesis protein3e-76285
NC_009783:670449:675651675651676613963Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-74280
NC_013166:961431:965846965846966832987Kangiella koreensis DSM 16069, complete genomelipopolysaccharide biosynthesis protein1e-66253
NC_006512:551312:5692315692315702411011Idiomarina loihiensis L2TR, complete genomeChain length determinant protein4e-64245
NC_017506:2504746:253203025320302532995966Marinobacter adhaerens HP15 chromosome, complete genomelipopolysaccharide biosynthesis protein1e-60233
NC_009831:3583856:360407836040783605031954Shewanella sediminis HAW-EB3, complete genomechain length determinant family protein1e-56220
NC_007645:2408125:243705224370522438005954Hahella chejuensis KCTC 2396, complete genomeuncharacterized protein involved in exopolysaccharide biosynthesis2e-49196
NC_011026:2450325:245863724586372459392756Chloroherpeton thalassium ATCC 35110, complete genomelipopolysaccharide biosynthesis protein5e-35148
NC_012997:1446037:145350014535001454381882Teredinibacter turnerae T7901, complete genomechain length determinant protein4e-34145
NC_000918:336232:3427333427333440341302Aquifex aeolicus VF5, complete genomehypothetical protein6e-0858.5
NC_013894:117644:124148124148124972825Thermocrinis albus DSM 14484 chromosome, complete genomelipopolysaccharide biosynthesis protein4e-0755.8