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Query: NC_009438:2058566:2070103 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 2070103, End: 2071080, Length: 978

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:3869904:387329738732973874274978Shewanella baltica OS185 chromosome, complete genomeCRISPR-associated Cas1 family protein0636
NC_016901:3936944:394033739403373941314978Shewanella baltica OS678 chromosome, complete genomeCRISPR-associated protein Cas10635
NC_009997:3988980:399237339923733993350978Shewanella baltica OS195, complete genomeCRISPR-associated protein Cas10635
NC_015873:1933036:194125919412591942242984Megasphaera elsdenii DSM 20460, complete genomeCRISPR-associated protein CaS18e-115413
NC_017098:477000:482253482253483212960Spirochaeta africana DSM 8902 chromosome, complete genomeCRISPR-associated endonuclease Cas13e-113408
NC_015436:1322087:132911713291171330094978Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated protein, Cas1 family6e-108390
NC_014532:110875:1178331178331189001068Halomonas elongata DSM 2581, complete genomehypothetical protein4e-97354
NC_013421:4006085:402666740266674027647981Pectobacterium wasabiae WPP163, complete genomeCRISPR-associated protein Cas13e-96352
NC_014216:1787000:179935317993531800330978Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeCRISPR-associated protein Cas15e-95347
NC_013889:2561381:256688225668822567859978Thioalkalivibrio sp. K90mix chromosome, complete genomeCRISPR-associated protein Cas13e-92338
NC_014836:993448:100800710080071008984978Desulfurispirillum indicum S5 chromosome, complete genomeCRISPR-associated protein Cas11e-90333
NC_016818:1963875:196290119629011963878978Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeCRISPR-associated endonuclease Cas16e-87321
NC_012796:4693500:4734156473415647351871032Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-84313
NC_018145:683874:701106701106702083978Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeCRISPR-associated protein Cas12e-83309
NC_016932:1791868:179379217937921794745954Corynebacterium pseudotuberculosis 316 chromosome, complete genomeCRISPR-associated protein8e-1788.2
NC_015434:2527412:252808625280862529054969Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cas1 family protein5e-1065.5
NC_002935:2292835:230472923047292305688960Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein4e-0962.4
NC_016782:2235000:224840122484012249360960Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein4e-0962.4
NC_016786:2235731:224900022490002249959960Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein4e-0962.4
NC_014727:798191:817520817520818470951Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein2e-0757.4
NC_008054:745704:762222762222763172951Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein2e-0757
NC_008529:735233:754399754399755316918Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein2e-0757