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Query: NC_009438:1282022:1293603 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 1293603, End: 1293842, Length: 240

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:3435495:343898134389813439220240Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF3393e-40163
NC_020064:3825916:384567838456783845944267Serratia marcescens FGI94, complete genomehypothetical protein1e-1995.5
NC_016612:477407:509473509473509739267Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-1890.5
NC_012779:3176820:322934232293423229608267Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-1889.7
NC_014121:4299500:433323143332314333497267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-1786.3
NC_012962:1364638:138407513840751384341267Photorhabdus asymbiotica, complete genomehypothetical protein1e-1685.1
NC_013956:3525711:354597135459713546258288Pantoea ananatis LMG 20103 chromosome, complete genomeYgfY6e-1682.8
NC_012660:1579204:160390416039041604158255Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-1580.1
NC_012560:1322000:132792413279241328178255Azotobacter vinelandii DJ, complete genomehypothetical protein8e-1475.9
NC_021150:1322000:132793613279361328190255Azotobacter vinelandii CA6, complete genomehypothetical protein8e-1475.9
NC_010995:2547164:255115825511582551403246Cellvibrio japonicus Ueda107, complete genomeTPR repeat family protein6e-1372.8
NC_008767:927810:927810927810928058249Neisseria meningitidis FAM18, complete genomehypothetical protein1e-0858.5