Pre_GI: BLASTP Hits

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Query: NC_009438:1282022:1284178 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 1284178, End: 1284849, Length: 672

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:3435495:344797434479743448645672Shewanella sp. W3-18-1, complete genomeDNA mismatch repair endonuclease mutH5e-127453
NC_011566:3994239:400978740097874010416630Shewanella piezotolerans WP3, complete genomeDNA mismatch repair enzyme MutH2e-80298
NC_015633:2565753:260301226030122603821810Vibrio anguillarum 775 chromosome chromosome I, complete sequenceMutH7e-74276
NC_016513:1720006:173292117329211733589669Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA mismatch repair protein2e-70265
NC_010278:1235934:125163512516351252315681Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA mismatch repair protein7e-66249
NC_004545:15650:188481884819510663Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeDNA mismatch repair protein6e-42170