Pre_GI: BLASTP Hits

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Query: NC_009434:1580205:1595320 Pseudomonas stutzeri A1501, complete genome

Start: 1595320, End: 1596195, Length: 876

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004757:267165:267165267165268085921Nitrosomonas europaea ATCC 19718, complete genomeToprim domain4e-63241
NC_016026:2170500:218366521836652184543879Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein6e-41167
NC_003295:2669480:2689399268939926919452547Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-39162
NC_017033:2081206:210437521043752105307933Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein5e-30131
NC_015136:2021799:2045288204528820481372850Burkholderia sp. CCGE1001 chromosome 1, complete sequenceToprim sub domain-containing protein4e-25115
NC_009256:2725836:2727734272773427301272394Burkholderia vietnamiensis G4 chromosome 1, complete sequenceTOPRIM domain-containing protein2e-22106
NC_012751:942315:9547339547339572192487Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA primase TraC3e-22105
NC_014664:1614568:1614568161456816171172550Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein3e-21102
NC_008390:2643653:2653394265339426557872394Burkholderia cepacia AMMD chromosome 1, complete sequenceTOPRIM domain protein9e-21100
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein2e-1996.7
NC_012796:1600600:1627250162725016291331884Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-1995.5
NC_004129:2201780:2215930221593022181672238Pseudomonas fluorescens Pf-5, complete genomeDNA primase domain protein3e-1892.4
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein5e-1891.7
NC_017506:2089769:209501420950142095910897Marinobacter adhaerens HP15 chromosome, complete genomevirulence-associated E family protein1e-1790.5
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein2e-1790.1
NC_004632:28470:4292242922475954674Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,DNA primase TraC3e-1789.4
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein6e-1788.2
NC_004578:3849835:3854392385439238566112220Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase domain protein1e-1687.4
NC_002947:3404000:3421840342184034240502211Pseudomonas putida KT2440, complete genomepyocin R2_PP, traC domain protein1e-1687.4
NC_017986:5509569:5526345552634555285552211Pseudomonas putida ND6 chromosome, complete genomeTraC domain-containing protein1e-1687
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase2e-1686.7
NC_009778:567000:5928395928395951542316Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1686.3
NC_014801:1:1675416754179801227Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,cpp226e-1684.7
NC_014306:4376012:4407434440743444097642331Erwinia billingiae Eb661, complete genomePlasmid and phage DNA primase1e-1584
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein2e-1583.6
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein2e-1583.6
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 21e-1583.6
NC_012724:3222415:3224293322429332271692877Burkholderia glumae BGR1 chromosome 1, complete genomeInner membrane protein2e-1583.2
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein2e-1582.8
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein3e-1582.8
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein3e-1582.4
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase5e-1582
NC_014972:480355:4964064964064988622457Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein4e-1582
NC_009778:2951207:2967702296770229701372436Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-1581.6
NC_012917:3684840:3686089368608936884162328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family1e-1480.9
NC_013508:3593000:3604038360403836063652328Edwardsiella tarda EIB202, complete genomehypothetical protein2e-1480.1
NC_007613:4217557:4217557421755742198902334Shigella boydii Sb227, complete genomeputative DNA primase2e-1479.7
NC_003198:4676536:4692212469221246945452334Salmonella enterica subsp. enterica serovar Typhi str. CT18,Bacteriophage P4 DNA primase3e-1479.3
NC_015968:3301958:3325863332586333285352673Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein3e-1479.3
NC_020211:103371:1041651041651064982334Serratia marcescens WW4, complete genomeP4-specific DNA primase3e-1479.3
NC_010498:4072681:4089863408986340921962334Escherichia coli SMS-3-5, complete genomeD5 family nucleoside triphosphatase3e-1479.3
NC_011094:380428:3832303832303859022673Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-1479
NC_010468:1130000:1146686114668611490192334Escherichia coli ATCC 8739, complete genomephage/plasmid primase, P4 family6e-1478.2
NC_011080:2870428:2886088288608828884212334Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase7e-1478.2
NC_012917:833721:8345098345098368362328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family9e-1477.8
NC_011740:810411:8262408262408289122673Escherichia fergusonii ATCC 35469, complete genomePutative inner membrane protein (modular protein) from phage origin8e-1477.8
NC_014306:4901390:4936659493665949389892331Erwinia billingiae Eb661, complete genomePhage/plasmid primase, P4 family8e-1477.8
NC_011740:448000:4485024485024508352334Escherichia fergusonii ATCC 35469, complete genomephage DNA primase1e-1377.4
NC_020211:996497:1011327101132710136752349Serratia marcescens WW4, complete genomephage/plasmid primase, P4 family1e-1377
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein1e-1377
NC_015381:1173603:1192541119254111952732733Burkholderia gladioli BSR3 chromosome 1, complete sequencepyocin R2_PP, TraC domain-containing protein2e-1377
NC_010102:2862178:2865648286564828679812334Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1377
NC_011080:4703266:4718963471896347212932331Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase2e-1376.6
NC_013956:3273340:3273675327367532759992325Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha2e-1376.3
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein2e-1376.3
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase4e-1375.5
NC_016857:2871689:2897909289790929002422334Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bacteriophage P4 DNA primase8e-1374.7
NC_017046:2896651:2896651289665128989842334Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage P4 DNA primase8e-1374.7
NC_016810:2871689:2897858289785829002422385Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage P4 DNA primase8e-1374.7
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein7e-1374.7
NC_011083:2542876:2556453255645325591402688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,zinc-binding domain of primase-helicase family7e-1374.7
NC_021066:5342127:5355667535566753580092343Raoultella ornithinolytica B6, complete genomeZinc binding domain / DNA primase9e-1374.3
NC_009436:3367194:3382164338216433844972334Enterobacter sp. 638, complete genomeplasmid and phage DNA primase1e-1273.9
CP002797:2472908:2472908247290824755952688Escherichia coli NA114, complete genomeputative phage protein1e-1273.6
NC_013892:3278647:3281299328129932824681170Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase (fragment)2e-1273.2
NC_006511:4465495:4468141446814144704742334Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-1272.4
NC_011147:4460726:4463371446337144657042334Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-1272.4
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family3e-1272.4
NC_013956:4326388:4327056432705643297282673Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha5e-1271.6
NC_013508:3188978:3219050321905032208851836Edwardsiella tarda EIB202, complete genomebacteriophage P4 DNA primase7e-1271.2
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase7e-1271.2
NC_016845:575123:5911475911475934802334Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoside triphosphatase, D5 family8e-1271.2
NC_014029:1283500:128602212860221286777756Yersinia pestis Z176003 chromosome, complete genomeputative prophage DNA primase3e-1169.3
NC_017154:1225500:122811512281151228870756Yersinia pestis D106004 chromosome, complete genomeputative prophage DNA primase3e-1169.3
NC_017160:1507500:152274115227411523496756Yersinia pestis D182038 chromosome, complete genomeputative prophage DNA primase3e-1169.3
NC_005810:1130251:114511511451151146104990Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-1168.2
NC_004088:3382148:339701133970113398000990Yersinia pestis KIM, complete genomehypothetical protein6e-1168.2
NC_003143:1233128:123682512368251237784960Yersinia pestis CO92, complete genomeputative prophage DNA primase6e-1168.2
NC_008149:3251196:326609032660903267049960Yersinia pestis Nepal516, complete genomeprophage DNA primase6e-1168.2
NC_008150:650899:653561653561654520960Yersinia pestis Antiqua, complete genomeputative prophage DNA primase6e-1168.2
NC_010159:1417993:142097714209771421936960Yersinia pestis Angola, complete genome6e-1168.2
NC_017168:4155143:415884141588414159800960Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-1168.2
NC_017265:1136000:113815511381551139114960Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage DNA primase6e-1168.2
NC_008390:2058500:2059577205957720620842508Burkholderia cepacia AMMD chromosome 1, complete sequencevirulence-associated E family protein9e-1167.8
NC_009381:2939782:295467529546752955634960Yersinia pestis Pestoides F chromosome, complete genomeprophage DNA primase1e-1067.4
NC_015381:3457784:347948334794833480445963Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-1066.6
NC_013008:306953:3247503247503270832334Escherichia coli O157:H7 str. TW14359 chromosome, complete genomealpha replication protein of prophage CP-933I2e-1066.2
NC_011353:305820:3234383234383257712334Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoside triphosphatase, D5 family2e-1066.2
NC_002695:301939:3195583195583218912334Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA primase2e-1066.2
NC_014121:1101093:1113609111360911162962688Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc-binding domain of primase-helicase family protein4e-1065.9
NC_015856:3912195:3940210394021039427262517Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-1065.9
NC_015061:1251905:1265618126561812682932676Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-1065.9
NC_013941:338121:3604753604753628652391Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAlpha replication protein of prophage CP-933I3e-1065.9
NC_012724:3100430:3107328310732831098292502Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein3e-1065.9
NC_002655:301940:3195023195023218922391Escherichia coli O157:H7 EDL933, complete genomealpha replication protein of prophage CP-933I3e-1065.9
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9277e-1064.7
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC1e-0964.3
NC_010694:2716348:2731726273172627345542829Erwinia tasmaniensis, complete genomePutative prophage primase7e-0961.6
NC_007086:3334000:3334900333490033384633564Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-0860.8
NC_003902:1680414:1703794170379417073573564Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-0860.8
NC_010688:3229820:3232161323216132357243564Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-0860.8
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC1e-0757
NC_010688:3030873:3030873303087330343973525Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-0756.6
NC_013722:218847:2332592332592357272469Xanthomonas albilineans, complete genomehypothetical protein4e-0755.8
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9274e-0755.5