Some Help

Query: NC_009381:627685:654325 Yersinia pestis Pestoides F chromosome, complete genome

Start: 654325, End: 655284, Length: 960

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017160:945176:971822971822972781960Yersinia pestis D182038 chromosome, complete genomeglutathione synthetase0655
NC_017154:941065:969847969847970806960Yersinia pestis D106004 chromosome, complete genomeglutathione synthetase0655
NC_008150:361224:389987389987390946960Yersinia pestis Antiqua, complete genomeglutathione synthetase0655
NC_014228:3022903:302446130244613025423963Xenorhabdus nematophila ATCC 19061, complete genomeglutathione synthetase6e-157553
NC_014541:643604:646356646356647300945Ferrimonas balearica DSM 9799 chromosome, complete genomeglutathione synthase6e-135480
NC_009465:29735:526285262853590963Candidatus Vesicomyosocius okutanii HA, complete genomeglutathione synthetase1e-88327
NC_012856:207194:234760234760235731972Ralstonia pickettii 12D chromosome 1, complete genomeglutathione synthetase5e-85314
NC_009257:775538:797965797965798939975Francisella tularensis subsp. tularensis WY96-3418 chromosome,glutathione synthetase9e-85313
NC_010622:249625:303493303493304449957Burkholderia phymatum STM815 chromosome 1, complete sequenceglutathione synthetase8e-78290
NC_013016:1441424:146261014626101463566957Neisseria meningitidis alpha14 chromosome, complete genomeglutathione synthetase4e-75281
NC_016812:4246542:424884742488474249794948Sinorhizobium fredii HH103, complete genomeglutathione synthetase4e-71268
NC_015711:2050360:205214520521452053113969Myxococcus fulvus HW-1 chromosome, complete genomeglutathione synthase2e-56219
NC_010475:1161000:118088211808821181841960Synechococcus sp. PCC 7002, complete genomeglutathione synthase8e-56217
NC_016940:3696570:371337737133773714345969Saprospira grandis str. Lewin chromosome, complete genomeglutathione synthetase3e-1272.8
NC_013156:182896:204352204352205227876Methanocaldococcus fervens AG86, complete genomealpha-L-glutamate ligase, RimK family2e-0757
NC_013851:3166969:3188785318878531913402556Allochromatium vinosum DSM 180 chromosome, complete genomealpha-L-glutamate ligase, RimK family1e-0653.9
NC_014500:4049384:4057695405769540587021008Dickeya dadantii 3937 chromosome, complete genomeputative glutathione synthase6e-0652