Pre_GI: BLASTP Hits

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Query: NC_009381:627685:653224 Yersinia pestis Pestoides F chromosome, complete genome

Start: 653224, End: 653646, Length: 423

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:854492:880032880032880454423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative Holliday junction resolvase1e-76284
NC_017168:50391:760187601876440423Yersinia pestis A1122 chromosome, complete genomeHolliday junction resolvase-like protein1e-76284
NC_017160:945176:970721970721971143423Yersinia pestis D182038 chromosome, complete genomeHolliday junction resolvase-like protein1e-76284
NC_017154:941065:968746968746969168423Yersinia pestis D106004 chromosome, complete genomeHolliday junction resolvase-like protein1e-76284
NC_008150:361224:388886388886389308423Yersinia pestis Antiqua, complete genomehypothetical protein1e-76284
NC_007954:3171081:320662432066243207049426Shewanella denitrificans OS217, complete genomeHolliday junction resolvase YqgF3e-51200
NC_009092:1305355:132007713200771320496420Shewanella loihica PV-4, complete genomeHolliday junction resolvase YqgF2e-49193
NC_011000:3409126:343230234323023432751450Burkholderia cenocepacia J2315 chromosome 1, complete sequenceHolliday junction resolvase-like protein1e-24112
NC_006348:2071749:209433520943352094775441Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceHolliday junction resolvase-like protein5e-25112
NC_010084:2717443:274253827425382742987450Burkholderia multivorans ATCC 17616 chromosome 1, completeHolliday junction resolvase-like protein2e-24110
NC_010804:782222:781786781786782235450Burkholderia multivorans ATCC 17616 chromosome 1, completeputative holliday junction resolvase2e-24110
NC_008390:818571:818135818135818584450Burkholderia cepacia AMMD chromosome 1, complete sequenceHolliday junction resolvase YqgF6e-24109
NC_014311:2781898:280294328029432803377435Ralstonia solanacearum PSI07 chromosome, complete genomeHolliday junction resolvase1e-22105
NC_014722:2260489:228571122857112286151441Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-22104
NC_010682:661272:661272661272661703432Ralstonia pickettii 12J chromosome 1, complete sequenceHolliday junction resolvase YqgF5e-22102
NC_011891:3004000:300595330059533006366414Anaeromyxobacter dehalogenans 2CP-1, complete genomeHolliday junction resolvase YqgF1e-2098.2
NC_007760:1415663:142935014293501429763414Anaeromyxobacter dehalogenans 2CP-C, complete genomeHolliday junction resolvase YqgF2e-2097.8
NC_020126:8287556:829450682945068294970465Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1890.9
NC_014377:1298806:130979013097901310227438Thermosediminibacter oceani DSM 16646 chromosome, complete genomeHolliday junction resolvase YqgF4e-1889.7
NC_017030:7967192:797333679733367973800465Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-1788.6
NC_009465:29735:490144901449442429Candidatus Vesicomyosocius okutanii HA, complete genomehypothetical protein1e-1788.6
NC_018515:989616:100484610048461005262417Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRNAse H-fold protein YqgF3e-1787
NC_008095:7211395:721748872174887217943456Myxococcus xanthus DK 1622, complete genomeconserved hypothetical protein TIGR002504e-1786.7
NC_021182:2422226:244403424440342444456423Clostridium pasteurianum BC1, complete genomeRNAse H-fold protein YqgF4e-1580.1
NC_017200:4191963:420320742032074203620414Bacillus thuringiensis serovar finitimus YBT-020 chromosome,Holliday junction resolvase-like protein9e-1579
NC_005957:4169610:418104241810424181455414Bacillus thuringiensis serovar konkukian str. 97-27, completeHolliday junction resolvase-like protein9e-1579
NC_014335:4113154:412357441235744123987414Bacillus cereus biovar anthracis str. CI chromosome, completeholliday junction resolvase-like protein9e-1579
NC_007530:4176462:419188541918854192298414Bacillus anthracis str. 'Ames Ancestor', complete genomeHolliday junction resolvase-like protein9e-1579
NC_009495:2685646:269891126989112699324414Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeHolliday junction resolvase-like protein1e-1478.6
NC_009699:2733529:274687527468752747288414Clostridium botulinum F str. Langeland chromosome, complete genomeHolliday junction resolvase-like protein1e-1478.6
NC_010184:4219257:422831642283164228729414Bacillus weihenstephanensis KBAB4, complete genomeHolliday junction resolvase YqgF1e-1478.6
NC_011658:4171237:418266141826614183074414Bacillus cereus AH187 chromosome, complete genomeHolliday junction resolvase-like protein1e-1478.6
NC_011969:4065460:407802140780214078434414Bacillus cereus Q1 chromosome, complete genomeholliday junction resolvase-like protein1e-1478.6
NC_015711:4033975:404848940484894048959471Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-1478.2
NC_014098:1114076:111924311192431119716474Bacillus tusciae DSM 2912 chromosome, complete genomeHolliday junction resolvase YqgF2e-1478.2
NC_011772:4321117:432987643298764330289414Bacillus cereus G9842, complete genomehypothetical protein TIGR002502e-1477.8
NC_020272:1311932:131492813149281315344417Bacillus amyloliquefaciens IT-45, complete genomeHolliday junction resolvase-like protein2e-1477.8
NC_020995:2636519:264980626498062650237432Enterococcus casseliflavus EC20, complete genomeYqgF family RNAse H domain-containing protein3e-1373.9
NC_008593:1461771:147028614702861470693408Clostridium novyi NT, complete genomePutative Holliday junction resolvase6e-1372.8
NC_015687:1811573:183169718316971832104408Clostridium acetobutylicum DSM 1731 chromosome, complete genomeHolliday junction resolvase-like protein3e-1270.5
NC_017295:1809386:182951018295101829917408Clostridium acetobutylicum EA 2018 chromosome, complete genomeHolliday junction resolvase-like protein3e-1270.5
NC_020134:2237421:225268522526852253107423Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative holliday junction resolvase5e-1269.7
NC_003030:1811820:183009718300971830504408Clostridium acetobutylicum ATCC 824, complete genomeHolliday junction resolvase-like protein6e-1269.7
NC_014328:1307490:131670813167081317121414Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Holliday junction resolvase6e-1269.3
NC_012469:198096:216358216358216777420Streptococcus pneumoniae Taiwan19F-14, complete genomehypothetical protein7e-1269.3
NC_010380:254088:272370272370272789420Streptococcus pneumoniae Hungary19A-6, complete genomehypothetical protein7e-1269.3
NC_017080:942416:950710950710951177468Phycisphaera mikurensis NBRC 102666, complete genomeputative Holliday junction resolvase7e-1269.3
NC_018870:1695588:169748616974861697914429Thermacetogenium phaeum DSM 12270 chromosome, complete genomeholliday junction resolvase9e-1268.9
NC_006833:902744:905597905597906064468Wolbachia endosymbiont strain TRS of Brugia malayi, completePredicted endonuclease involved in recombination, RNase H fold, yqgF family8e-1268.9
NC_014251:440875:458579458579458989411Streptococcus pneumoniae TCH8431/19A chromosome, complete genomecrossover junction endodeoxyribonuclease2e-1167.4
NC_011126:163878:181505181505181876372Hydrogenobaculum sp. Y04AAS1, complete genomeHolliday junction resolvase YqgF1e-1065.1
NC_014844:2638994:263860526386052639021417Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeHolliday junction resolvase YqgF4e-1063.5
NC_013894:117644:136291136291136692402Thermocrinis albus DSM 14484 chromosome, complete genomeHolliday junction resolvase YqgF1e-0962
NC_019907:1060005:106084810608481061327480Liberibacter crescens BT-1 chromosome, complete genomePutative Holliday junction resolvase3e-0960.5
NC_002771:682599:684840684840685280441Mycoplasma pulmonis UAB CTIP, complete genomehypothetical protein7e-0959.3
NC_014836:497350:500553500553501011459Desulfurispirillum indicum S5 chromosome, complete genomeHolliday junction resolvase YqgF9e-0958.9
NC_011025:183287:189077189077189520444Mycoplasma arthritidis 158L3-1, complete genomeputative Holliday junction resolvase2e-0858.2
NC_007633:253143:259234259234259665432Mycoplasma capricolum subsp. capricolum ATCC 27343, completeholliday junction resolvase, putative2e-0857.8
NC_003454:1346500:135675113567511357167417Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeDNA integration/recombination/invertion protein3e-0857
NC_014210:3671495:367403736740373674522486Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Holliday junction resolvase YqgF5e-0856.6
NC_008817:709370:713790713790714245456Prochlorococcus marinus str. MIT 9515, complete genomePredicted endonuclease involved in recombination6e-0856.2
NC_014751:302152:307459307459307890432Mycoplasma leachii PG50 chromosome, complete genomeRNAse YqgF1e-0755.5
NC_014632:402500:412497412497412916420Ilyobacter polytropus DSM 2926 chromosome, complete genomeHolliday junction resolvase YqgF2e-0754.7
NC_015185:485866:493192493192493617426Desulfurobacterium thermolithotrophum DSM 11699 chromosome,Holliday junction resolvase3e-0650.4