Pre_GI: BLASTP Hits

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Query: NC_009381:522731:536079 Yersinia pestis Pestoides F chromosome, complete genome

Start: 536079, End: 536933, Length: 855

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3724500:373252037325203733374855Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly5e-161566
NC_004088:3859173:386716038671603868014855Yersinia pestis KIM, complete genomehypothetical protein5e-161566
NC_008150:3430000:343804234380423438896855Yersinia pestis Antiqua, complete genomehypothetical protein5e-161566
NC_008149:650706:664055664055664909855Yersinia pestis Nepal516, complete genomehypothetical protein5e-161566
NC_014029:792719:806062806062806916855Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-161566
NC_017154:734875:748225748225749079855Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-161566
NC_017160:737000:750403750403751257855Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-161566
NC_017168:341233:349930349930350784855Yersinia pestis A1122 chromosome, complete genomepilus assembly protein CpaC5e-161566
NC_010159:259695:267682267682268536855Yersinia pestis Angola, complete genome3e-160564
NC_006155:3992818:4005940400594040072591320Yersinia pseudotuberculosis IP 32953, complete genomeputative outer membrane secretin family protein1e-155548
NC_010634:3905369:3917401391740139187201320Yersinia pseudotuberculosis PB1/+, complete genometype II and III secretion system protein1e-155548
NC_009708:692508:7054477054477067661320Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II/III secretion system protein2e-151535
NC_010465:733916:7458167458167470871272Yersinia pseudotuberculosis YPIII, complete genometype II and III secretion system protein4e-145513
NC_008800:3955284:3963583396358339649441362Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein7e-93340
NC_015224:3820338:3841986384198638432181233Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein2e-84312
NC_012913:167034:1797691797691811511383Aggregatibacter aphrophilus NJ8700, complete genomeRcpA3e-47188
NC_016513:974402:9904159904159917971383Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completerough colony protein A1e-44179
NC_013716:4306695:4368296436829643697441449Citrobacter rodentium ICC168, complete genomeputative tight adherence secretin RcpA9e-43174
NC_013416:668152:6841566841566854181263Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRcpA6e-42171
NC_002940:1065246:1068170106817010695401371Haemophilus ducreyi 35000HP, complete genomerough colony protein A3e-41169
NC_004605:741000:7519177519177532601344Vibrio parahaemolyticus RIMD 2210633 chromosome II, completerough colony protein RcpA3e-38158
NC_005140:660305:6707986707986721231326Vibrio vulnificus YJ016 chromosome II, complete sequencerough colony protein RcpA5e-37154
NC_004460:81687:9219392193935031311Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein5e-37154
NC_014966:638355:6487766487766501011326Vibrio vulnificus MO6-24/O chromosome II, complete sequencetype II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly1e-36154
NC_004547:843475:8629858629858644211437Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-25116
NC_002678:5139557:5149189514918951504871299Mesorhizobium loti MAFF303099, complete genometype II secretion system protein5e-1891.7
NC_017249:8221992:8262784826278482642381455Bradyrhizobium japonicum USDA 6, complete genomeRhcC2 protein5e-1788.6
NC_004463:1992000:1995366199536619966581293Bradyrhizobium japonicum USDA 110, complete genomeRhcC2 protein5e-1788.6
NC_009485:1604942:1606415160641516079051491Bradyrhizobium sp. BTAi1 chromosome, complete genomepilus assembly protein CpaC5e-1375.1
NC_009831:2884851:2884851288485128863021452Shewanella sediminis HAW-EB3, complete genomeflp pilus assembly protein, secretin CpaC3e-1272.8
NC_016613:2759908:2780675278067527821411467Vibrio sp. EJY3 chromosome 1, complete sequencepilus assembly protein CpaC2e-1272.8
NC_009901:2427291:2439095243909524405311437Shewanella pealeana ATCC 700345, complete genometype II and III secretion system protein5e-1065.1
NC_010334:2749250:2763724276372427651601437Shewanella halifaxensis HAW-EB4, complete genometype II and III secretion system protein5e-1065.1
NC_002932:440191:4498054498054511421338Chlorobium tepidum TLS, complete genometype II secretion system protein1e-0963.9
NC_013223:1349000:1371223137122313725901368Desulfohalobium retbaense DSM 5692, complete genometype II and III secretion system protein9e-0960.8
NC_006512:952894:9589629589629601761215Idiomarina loihiensis L2TR, complete genomepossible Flp pilus assembly protein CpaC2e-0859.7
NC_008260:228475:2363302363302375501221Alcanivorax borkumensis SK2, complete genometype II secretion system protein, probable2e-0859.7
NC_018691:198909:2068202068202080311212Alcanivorax dieselolei B5 chromosome, complete genomeType II secretion system protein, probable1e-0654.3
NC_016002:2453919:2488858248885824904201563Pseudogulbenkiania sp. NH8B, complete genometype II and III secretion system protein1e-0653.5
NC_011661:1049767:1051499105149910557644266Dictyoglomus turgidum DSM 6724, complete genometype II and III secretion system protein4e-0652.4