Pre_GI: BLASTP Hits

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Query: NC_009381:1783886:1813111 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1813111, End: 1813560, Length: 450

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:3609844:365082336508233651269447Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1198)2e-43174
NC_012779:2957000:297935629793562979841486Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1787
NC_006511:3759550:377366737736673774119453Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-1580.9
NC_011083:3985618:399974439997444000196453Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1580.9
NC_006905:3913988:392520239252023925660459Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-1580.9
NC_004631:3841975:384829338482933848751459Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1580.9
NC_003198:3855157:386280338628033863261459Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1580.9
NC_016857:3993864:400684940068494007316468Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein2e-1580.9
NC_012125:3905782:391999339199933920460468Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1580.9
NC_003197:3971905:398553539855353985987453Salmonella typhimurium LT2, complete genomeputative inner membrane protein2e-1580.9
NC_011149:3895921:391004739100473910499453Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1580.9
NC_010102:3919999:393362939336293934081453Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1580.9
NC_016863:3933848:394683439468343947286453Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein2e-1580.9
NC_016860:4055117:409064640906464091098453Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1580.9
NC_016856:3985597:399922739992273999679453Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein2e-1580.9
NC_016810:3993863:400684840068484007300453Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1580.9
NC_011147:3755725:376934637693463769798453Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1580.9
NC_011094:3853036:386724738672473867699453Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1580.9
NC_011080:3941909:395611939561193956571453Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1580.9
NC_017046:3991551:400567640056764006119444Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-1579.3
NC_009792:4693152:471733047173304717782453Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-1476.3
NC_013956:1207500:121128312112831211789507Pantoea ananatis LMG 20103 chromosome, complete genomeYicN1e-1375.5
NC_016816:3373950:338507333850733385564492Pantoea ananatis LMG 5342, complete genomeinner membrane protein YicN3e-1373.9
NC_014837:1144500:114731011473101147810501Pantoea sp. At-9b chromosome, complete genomehypothetical protein3e-1373.9
NC_004337:3590323:390900139090013909480480Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-1372.8
NC_014562:469154:474383474383474886504Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yicN7e-1372.8
NC_002655:4653160:469806646980664698545480Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-1271.6
NC_002695:4584177:462908346290834629562480Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1271.6
NC_013941:4470932:451657645165764517055480Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1271.6
NC_011353:4688000:473218747321874732639453Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-1271.6
NC_011601:4096427:414205641420564142508453Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1271.6
NC_013008:4643825:468822846882284688680453Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1271.6
NC_011750:4390000:443754144375414437993453Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-1271.2
NC_021066:4177217:419037041903704190822453Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1064.3
NC_013716:4306695:434043943404394340801363Citrobacter rodentium ICC168, complete genome3e-0857.4