Pre_GI: BLASTP Hits

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Query: NC_009381:1682000:1689875 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1689875, End: 1690012, Length: 138

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2586729:259294325929432593080138Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase1e-1995.1
NC_008149:2802392:280860628086062808743138Yersinia pestis Nepal516, complete genometransposase1e-1995.1
NC_004088:2966331:297254529725452972682138Yersinia pestis KIM, complete genometransposase1e-1995.1
NC_008150:844727:888817888817888954138Yersinia pestis Antiqua, complete genomeputative transposase1e-1995.1
NC_012880:3529017:355402135540213554359339Dickeya dadantii Ech703, complete genome6e-1372.8
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein1e-1272
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase1e-1272
NC_012779:3570720:357882835788283579379552Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1167.4
NC_007608:97092:100298100298100906609Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS630 ORF5e-1166.6
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF7e-1166.2
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF7e-1166.2
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase6e-1166.2
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase6e-1166.2
NC_009786:43331:592285922860046819Escherichia coli E24377A plasmid pETEC_80, complete sequence6e-1166.2
NC_010660:175200:178407178407178829423Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence5e-1166.2
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf8e-1165.9
NC_012779:2424967:243273824327382433289552Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1065.5
NC_012779:2424967:243549724354972436486990Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1065.1
NC_009790:42112:634676346763685219Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS630, transposase, truncation1e-1065.1
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf4e-1063.5
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF4e-1063.5
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF4e-1063.5
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF4e-1063.5
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF4e-1063.5
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf4e-1063.5
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf4e-1063.5
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF4e-1063.5
CU928145:3360967:339013033901303390348219Escherichia coli 55989 chromosome, complete genomeputative transposase (fragment), IS630 family6e-1062.8
NC_011748:3360967:339013033901303390348219Escherichia coli 55989, complete genomeputative transposase (fragment), IS630 family6e-1062.8
NC_012779:2424967:244876924487692449023255Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-1062.8
NC_012779:2856051:286125928612592862020762Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0960.8
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase7e-0959.3
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase2e-0857.8
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase2e-0857.8
NC_012779:2127542:213321121332112133357147Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0857.8
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-0857
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative2e-0754.7
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative2e-0754.7
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family7e-0752.8