Pre_GI: BLASTP Hits

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Query: NC_009381:1414985:1414985 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1414985, End: 1415200, Length: 216

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2306500:231574723157472315962216Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-35146
NC_017168:3535786:353980435398043540019216Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-35146
NC_005810:1663672:166802816680281668243216Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-35146
NC_012912:844339:853487853487854014528Dickeya zeae Ech1591, complete genomehypothetical protein5e-1476.3
NC_013850:4829455:483801248380124838533522Klebsiella variicola At-22 chromosome, complete genomehypothetical protein8e-0958.9