Query: NC_009380:581000 Salinispora tropica CNB-440 chromosome, complete genome
Start: 581000, End: 631102, Length: 50103
Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015434:1173794 | 1173794 | 1199970 | 26177 | Verrucosispora maris AB-18-032 chromosome, complete genome | 2e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014815:841484* | 841484 | 898099 | 56616 | Micromonospora sp. L5 chromosome, complete genome | 4e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_014391:621062* | 621062 | 644689 | 23628 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 2e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013757:900500 | 900500 | 918369 | 17870 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013510:991827* | 991827 | 1012599 | 20773 | Thermomonospora curvata DSM 43183, complete genome | 1e-10 | 77.8 | BLASTN svg | BLASTP svg |
| NC_013729:6217500* | 6217500 | 6235746 | 18247 | Kribbella flavida DSM 17836, complete genome | 4e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_013595:151500 | 151500 | 178599 | 27100 | Streptosporangium roseum DSM 43021, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_013595:702482* | 702482 | 728099 | 25618 | Streptosporangium roseum DSM 43021, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015957:4963500 | 4963500 | 4981352 | 17853 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-07 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015656:3653440 | 3653440 | 3678429 | 24990 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015656:1947810* | 1947810 | 1967750 | 19941 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003888:3602753 | 3602753 | 3626462 | 23710 | Streptomyces coelicolor A3(2), complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |