Query: NC_009380:336024 Salinispora tropica CNB-440 chromosome, complete genome
Start: 336024, End: 355342, Length: 19319
Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008699:4443000* | 4443000 | 4477667 | 34668 | Nocardioides sp. JS614, complete genome | 3e-147 | 529 | BLASTN svg | BLASTP svg |
NC_000962:3474000 | 3474000 | 3494181 | 20182 | Mycobacterium tuberculosis H37Rv, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_002755:3465582 | 3465582 | 3490239 | 24658 | Mycobacterium tuberculosis CDC1551, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_002945:3429315 | 3429315 | 3450138 | 20824 | Mycobacterium bovis AF2122/97, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_008769:3427254 | 3427254 | 3448076 | 20823 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_009525:3484924 | 3484924 | 3505599 | 20676 | Mycobacterium tuberculosis H37Ra, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_009565:3485772 | 3485772 | 3504774 | 19003 | Mycobacterium tuberculosis F11, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_012207:3421144 | 3421144 | 3440726 | 19583 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_014221:1167261 | 1167261 | 1187091 | 19831 | Truepera radiovictrix DSM 17093 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009921:522000 | 522000 | 562102 | 40103 | Frankia sp. EAN1pec, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014814:4326500 | 4326500 | 4351099 | 24600 | Mycobacterium sp. Spyr1 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |