Pre_GI: BLASTN Hits

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Query: NC_009380:3346132 Salinispora tropica CNB-440 chromosome, complete genome

Start: 3346132, End: 3365099, Length: 18968

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015434:25274122527412255409926688Verrucosispora maris AB-18-032 chromosome, complete genome1e-131478BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome3e-39170BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome2e-31145BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-31145BLASTN svgBLASTP svg
NC_003888:38931873893187391788524699Streptomyces coelicolor A3(2), complete genome2e-31145BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome2e-31145BLASTN svgBLASTP svg
NC_009921:33169623316962334366126700Frankia sp. EAN1pec, complete genome7e-19103BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome7e-19103BLASTN svgBLASTP svg
NC_013093:5653093*5653093568007326981Actinosynnema mirum DSM 43827, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003888:32134321345153919406Streptomyces coelicolor A3(2), complete genome4e-1487.7BLASTN svgBLASTP svg
NC_018750:77050077050079437823879Streptomyces venezuelae ATCC 10712, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome2e-0661.9BLASTN svgBLASTP svg