Pre_GI: BLASTN Hits

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Query: NC_009380:2310000 Salinispora tropica CNB-440 chromosome, complete genome

Start: 2310000, End: 2330021, Length: 20022

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015434:26577812657781268051822738Verrucosispora maris AB-18-032 chromosome, complete genome01070BLASTN svgBLASTP svg
NC_013510:22887462288746230946520720Thermomonospora curvata DSM 43183, complete genome9e-77295BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome5e-72280BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5e-63250BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete9e-43182BLASTN svgBLASTP svg
NC_006361:31320003132000316145129452Nocardia farcinica IFM 10152, complete genome2e-40174BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome1e-38168BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome6e-38167BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome3e-33151BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome3e-27131BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-21111BLASTN svgBLASTP svg
NC_008543:22206982220698226060739910Burkholderia cenocepacia HI2424 chromosome 2, complete sequence3e-21111BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-21111BLASTN svgBLASTP svg
NC_003552:11572941157294117654819255Methanosarcina acetivorans C2A, complete genome1e-20109BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome7e-19103BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_019940:38631243863124388578022657Thioflavicoccus mobilis 8321 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013595:37122573712257373380621550Streptosporangium roseum DSM 43021, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014216:28603422860342288514124800Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_009832:35000003500000352233422335Serratia proteamaculans 568, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010682:30336463033646306386630221Ralstonia pickettii 12J chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012856:26338902633890266223728348Ralstonia pickettii 12D chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013440:42354894235489425819522707Haliangium ochraceum DSM 14365, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013510:170199*17019920517334975Thermomonospora curvata DSM 43183, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013757:14388121438812147359934788Geodermatophilus obscurus DSM 43160, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020210:1704500*1704500175948154982Geobacillus sp. GHH01, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014836:2848000*2848000287078522786Desulfurispirillum indicum S5 chromosome, complete genome9e-0660BLASTN svgBLASTP svg