Pre_GI: BLASTN Hits

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Query: NC_009380:1606270 Salinispora tropica CNB-440 chromosome, complete genome

Start: 1606270, End: 1631615, Length: 25346

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014910:10507061050706106920318498Alicycliphilus denitrificans BC chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome2e-19105BLASTN svgBLASTP svg
NC_007164:77500077500079726122262Corynebacterium jeikeium K411, complete genome4e-21111BLASTN svgBLASTP svg
NC_014844:21583182158318217659218275Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_011146:22001422200142224285442713Geobacter bemidjiensis Bem, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019973:5838000*5838000586259924600Mesorhizobium australicum WSM2073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014923:59090005909000593359924600Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015675:64640006464000648809924100Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_014841:13130813130815514123834Pantoea sp. At-9b plasmid pPAT9B04, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_006177:52005552005554053820484Symbiobacterium thermophilum IAM 14863, complete genome3e-18101BLASTN svgBLASTP svg
NC_007516:16180331618033164737929347Synechococcus sp. CC9605, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_018870:22328572232857225309920243Thermacetogenium phaeum DSM 12270 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_019940:1670262*1670262169388723626Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008786:39150003915000394226927270Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015434:16715321671532169059919068Verrucosispora maris AB-18-032 chromosome, complete genome0809BLASTN svgBLASTP svg