Pre_GI: BLASTP Hits

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Query: NC_009380:3563421:3566694 Salinispora tropica CNB-440 chromosome, complete genome

Start: 3566694, End: 3567479, Length: 786

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009953:3852436:3855767385576738568551089Salinispora arenicola CNS-205 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-65248
NC_013729:3573000:3576362357636235774351074Kribbella flavida DSM 17836, complete genomeribosome small subunit-dependent GTPase A1e-31137
NC_013093:7222000:7237910723791072389441035Actinosynnema mirum DSM 43827, complete genomeGTPase EngC2e-23109
NC_016048:4163225:4176270417627041773461077Oscillibacter valericigenes Sjm18-20, complete genomeputative ribosome biogenesis GTPase RsgA8e-1890.9
NC_011899:1437981:1447570144757014486731104Halothermothrix orenii H 168, complete genomeribosome small subunit-dependent GTPase A3e-1789.4
NC_018524:1279156:1299259129925913003801122Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeribosome small subunit-dependent GTPase A1e-1687.4
NC_013665:918313:9454769454769465521077Methanocella paludicola SANAE, complete genomeprobable GTPase EngC4e-1685.1
NC_014624:1369642:1373597137359713746821086Eubacterium limosum KIST612 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-1582
NC_013406:3874157:3873087387308738741601074Paenibacillus sp. Y412MC10 chromosome, complete genomeGTPase EngC2e-1479.7
NC_018012:1789028:1795832179583217969051074Thiocystis violascens DSM 198 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-1376.6
NC_020291:3900046:3918950391895039200231074Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative ribosome biogenesis GTPase RsgA 17e-1374.3
NC_009483:936000:9421349421349432161083Geobacter uraniireducens Rf4 chromosome, complete genomeribosome small subunit-dependent GTPase A1e-1273.9
NC_011146:3206000:3213663321366332147301068Geobacter bemidjiensis Bem, complete genomeribosome small subunit-dependent GTPase A2e-1169.7
NC_012808:806432:811357811357812349993Methylobacterium extorquens AM1, complete genomeputative GTPase3e-1169.3
NC_010172:1079127:1085219108521910862531035Methylobacterium extorquens PA1, complete genomeGTPase EngC3e-1168.9
NC_011757:1146608:1153975115397511550091035Methylobacterium chloromethanicum CM4, complete genomeGTPase EngC5e-1168.6
NC_012918:1660477:1682321168232116833881068Geobacter sp. M21 chromosome, complete genomeribosome small subunit-dependent GTPase A7e-1167.8
NC_011886:404661:4079224079224089441023Arthrobacter chlorophenolicus A6, complete genomeGTPase EngC8e-1167.4
NC_013959:1195249:1209531120953112105891059Sideroxydans lithotrophicus ES-1 chromosome, complete genomeGTPase EngC1e-1067