Pre_GI: BLASTP Hits

Some Help

Query: NC_009380:1491428:1512341 Salinispora tropica CNB-440 chromosome, complete genome

Start: 1512341, End: 1513360, Length: 1020

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:7408466:743208074320807433060981Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein DeoR4e-80298
NC_013729:4978401:498611749861174987112996Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein6e-36151
NC_013729:4978401:499089449908944991847954Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein1e-35150
NC_009953:4942500:494594949459494946911963Salinispora arenicola CNS-205 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein7e-34144
NC_016114:4210173:4212930421293042139641035Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein DeoR1e-31137
NC_013729:5982000:598555659855565986518963Kribbella flavida DSM 17836, complete genomeHelix-turn-helix type 11 domain protein2e-30132
NC_013947:5075581:5081866508186650828761011Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein4e-29129
NC_015125:1668780:168712716871271688122996Microbacterium testaceum StLB037, complete genomepredicted transcriptional regulator9e-29127
NC_016114:3439273:344138634413863442381996Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein DeoR6e-26118
NC_013169:1845735:186560718656071866323717Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator7e-24111
NC_015671:1865752:188228018822801883251972Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDeoR family transcriptional regulator3e-22106
NC_018681:7692560:769893876989387699930993Nocardia brasiliensis ATCC 700358 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein4e-2099
NC_016048:3063888:308369630836963084625930Oscillibacter valericigenes Sjm18-20, complete genomeputative DeoR family transcriptional regulator6e-1375.5
NC_015500:1236874:124977012497701250702933Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein3e-1272.8
NC_008702:3375027:338766433876643388353690Azoarcus sp. BH72, complete genomeputative transcriptional regulator, deoR-family9e-1271.2
NC_015977:255029:265855265855266772918Roseburia hominis A2-183 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein3e-1066.6
NC_015690:790500:798606798606799568963Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator DeoR6e-1065.5
NC_016935:789849:798132798132799094963Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator DeoR6e-1065.1
NC_018866:2484500:249076824907682491700933Dehalobacter sp. DCA chromosome, complete genomeTranscriptional regulator, DeoR family8e-1065.1
NC_014639:1538782:157149115714911572453963Bacillus atrophaeus 1942 chromosome, complete genomeDeoR family transcriptional regulator9e-1064.7
CP002207:1538782:157149115714911572453963Bacillus atrophaeus 1942, complete genomeDeoR family transcriptional regulator9e-1064.7
NC_011886:2097349:211493021149302115628699Arthrobacter chlorophenolicus A6, complete genomeHelix-turn-helix type 11 domain protein3e-0963.2
NC_014551:2510000:253795525379552538917963Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein4e-0962.4
NC_015589:38418:620836208363015933Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDeoR family transcriptional regulator6e-0962
NC_013093:3996197:4004327400432740053371011Actinosynnema mirum DSM 43827, complete genomeHelix-turn-helix type 11 domain protein2e-0860.5
NC_014963:4872883:487407348740734874783711Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein2e-0860.5
NC_016641:5808113:582551958255195826481963Paenibacillus terrae HPL-003 chromosome, complete genomeDeoR family transcriptional regulator2e-0860.1
NC_015172:1195782:122718012271801228112933Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein3e-0859.7
NC_015277:3351504:337463733746373375632996Sphingobacterium sp. 21 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein3e-0859.7
NC_013946:305364:305364305364306329966Meiothermus ruber DSM 1279 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein4e-0756.2
NC_014117:442616:508243508243508986744Burkholderia sp. CCGE1002 chromosome chromosome 1, completeHelix-turn-helix type 11 domain protein6e-0755.5
NC_015663:3742738:374273837427383743427690Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-0755.1
NC_015601:436822:457563457563458489927Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeputative transcriptional regulator9e-0754.7
NC_014834:959986:975100975100975783684Rhodopseudomonas palustris DX-1 chromosome, complete genomeDeoR family transcriptional regulator2e-0653.5
NC_015690:8614000:862124486212448622191948Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein2e-0653.5
NC_015321:4287945:429367142936714294360690Fluviicola taffensis DSM 16823 chromosome, complete genomeregulatory protein DeoR3e-0653.1
UCMB5137:1594000:161226716122671613205939Bacillus atrophaeus UCMB-5137putative transcriptional regulator3e-0653.1
NC_016582:3763476:376836237683623769348987Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDeoR family transcriptional regulator4e-0652.8
NC_008752:261903:277097277097277780684Acidovorax avenae subsp. citrulli AAC00-1, complete genomeHelix-turn-helix, type 11 domain protein3e-0652.8
NC_015856:3536441:354052335405233541248726Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-0652.8
NC_016935:4233223:430075343007534301694942Paenibacillus mucilaginosus 3016 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein5e-0652.4
NC_015690:4469775:454444845444484545389942Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein5e-0652.4
NC_010572:8352462:8352462835246283534721011Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DeoR-family transcriptional regulator6e-0652