Pre_GI: BLASTP Hits

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Query: NC_009378:62215:86781 Yersinia pestis Pestoides F plasmid MT, complete sequence

Start: 86781, End: 88154, Length: 1374

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009998:62000:3389338947771389Shewanella baltica OS195 plasmid pS19501, complete sequenceTraH family protein5e-64245
NC_007490:76838:8043680436818331398Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequenceTraH6e-53208
NC_015580:1584078:1602583160258316040071425Novosphingobium sp. PP1Y, complete genomeconjugative transfer pilus assembly protein TraH3e-50199
NC_007794:2304768:2305885230588523073211437Novosphingobium aromaticivorans DSM 12444, complete genomeTraH1e-49197
NC_007722:2954876:2983691298369129850401350Erythrobacter litoralis HTCC2594, complete genomepilus assembly protein2e-45184
NC_007298:2856104:2856967285696728584151449Dechloromonas aromatica RCB, complete genomeTraH2e-34147
NC_010793:416849:4276344276344289351302Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH1e-34147
NC_010793:496500:5102025102025115031302Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH1e-34147
NC_008782:1566172:1580866158086615823141449Acidovorax sp. JS42, complete genomeTraH family protein5e-33142
NC_015422:3493396:3497095349709534985431449Alicycliphilus denitrificans K601 chromosome, complete genomeTraH family protein3e-32139
NC_010554:2646806:2659391265939126607791389Proteus mirabilis HI4320, complete genomepilus assembly protein3e-30133
NC_017044:702483:725338725338726231894Rickettsia parkeri str. Portsmouth chromosome, complete genomeF pilus assembly protein TraH1e-28127
NC_010793:1287877:129989112998911300784894Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH3e-27123
NC_010793:1628500:164017016401701641063894Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH8e-26118
NC_010793:1811401:185839518583951859288894Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH9e-26118
NC_011035:829945:8693358693358706931359Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein TraH7e-25115
NC_010793:1723365:173829917382991738928630Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH1e-20101
NC_010793:1508974:152100115210011521630630Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH3e-20100
NC_010793:1922000:195382719538271954492666Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraH5e-1789.4
NC_002939:2337402:2344357234435723458411485Geobacter sulfurreducens PCA, complete genomehypothetical protein4e-1686.7
NC_002939:2315402:2344357234435723458411485Geobacter sulfurreducens PCA, complete genomehypothetical protein4e-1686.7
NC_015976:2187377:2187377218737721888011425Sphingobium sp. SYK-6, complete genomesex pilus assembly protein TraH3e-1480.1
NC_007759:1740702:1757139175713917586051467Syntrophus aciditrophicus SB, complete genomepilus assembly protein1e-1274.7
NC_014836:1606587:1611356161135616128011446Desulfurispirillum indicum S5 chromosome, complete genomeTraH family protein5e-0652.8