Pre_GI: BLASTP Hits

Some Help

Query: NC_009378:62215:76650 Yersinia pestis Pestoides F plasmid MT, complete sequence

Start: 76650, End: 77573, Length: 924

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003134:64672:813348133482257924Yersinia pestis CO92 plasmid pMT1, complete sequenceputative F1 operon positive regulatory protein5e-169593
NC_008118:56777:712147121472137924Yersinia pestis Nepal516 plasmid pMT, complete sequenceF1 operon positive regulatory protein5e-169593
NC_005815:61148:775457754578468924Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative F1 operon positive regulatory protein5e-169593
NC_008120:62000:734377343774360924Yersinia pestis Antiqua plasmid pMT, complete sequenceF1 operon positive regulatory protein5e-169593
NC_004838:51013:771187711878023906Yersinia pestis KIM plasmid pMT-1, complete sequenceF1 capsule positive regulator3e-165581
NC_009788:16360:209962099621856861Escherichia coli E24377A plasmid pETEC_73, complete sequencetranscriptional regulator, AraC family1e-44179
NC_003197:1753663:176439617643961765253858Salmonella typhimurium LT2, complete genomeputative regulatory protein8e-24111
NC_006905:1766000:177752317775231778380858Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory helix-turn-helix proteins, araC family1e-23110
NC_009800:349592:366188366188367045858Escherichia coli HS, complete genometranscriptional regulator, AraC family1e-23110
NC_010498:301000:341410341410342267858Escherichia coli SMS-3-5, complete genomeAraC family transcriptional regulator2e-23109
NC_011080:1750000:176075417607541761605852Salmonella enterica subsp. enterica serovar Newport str. SL254,putative regulatory protein5e-23108
NC_011751:348000:368727368727369617891Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator ykgA4e-23108
NC_016860:1752000:176209317620931762944852Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein4e-23108
NC_006511:1273162:128151612815161282367852Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator4e-23108
NC_011147:1267005:127535912753591276210852Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator4e-23108
NC_011149:1429523:143788214378821438733852Salmonella enterica subsp. enterica serovar Agona str. SL483,putative regulatory protein3e-23108
NC_007946:289425:335558335558336448891Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YkgA2e-22107
NC_008563:318993:337148337148338038891Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-22107
NC_011601:273430:295401295401296258858Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator, AraC-type1e-22107
NC_011742:291237:324923324923325780858Escherichia coli S88 chromosome, complete genomePutatve transcriptional regulator ykgA1e-22107
NC_012947:3487392:349562134956213496472852Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAraC family transcriptional regulator1e-22107
NC_008253:334467:392253392253393110858Escherichia coli 536, complete genomeputative bacterial regulatory helix-turn-helix proteins, AraC family1e-22107
NC_013941:378555:396828396828397718891Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAraC family transcriptional regulator8e-23107
NC_011094:1726000:173757617375761738427852Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein8e-23107
NC_003198:1336894:134525413452541346105852Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator2e-22106
NC_004631:1623511:163507716350771635928852Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator2e-22106
NC_004431:364000:400086400086400976891Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ykgA6e-22105
NC_013850:2846069:284894728489472849846900Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, AraC family7e-1994.7
NC_011283:2836000:284208428420842842983900Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator7e-1994.7
NC_011283:2836000:285901228590122859911900Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator7e-1994.7
NC_014500:1646854:165106016510601651992933Dickeya dadantii 3937 chromosome, complete genomeRight origin-binding protein2e-1686.7
NC_000913:303719:315674315674316360687Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator3e-1686.3
AC_000091:303719:315674315674316360687Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator3e-1686.3
NC_010473:279948:291224291224291910687Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator3e-1686.3
NC_017046:1709578:172124717212471721990744Salmonella enterica subsp. enterica serovar Typhimurium str. 7984e-1582
NC_016863:1711832:172268017226801723423744Salmonella enterica subsp. enterica serovar Typhimurium str. UK-14e-1582
NC_016857:1709695:172136417213641722107744Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative regulatory protein4e-1582
NC_012880:2871480:288633428863342887275942Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family1e-1480.5
NC_012779:610509:614198614198615088891Edwardsiella ictaluri 93-146, complete genometranscriptional regulator, AraC family5e-1478.6
NC_015062:58826:588265882659182357Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceAraC family transcriptional regulator1e-1377.4
NC_015566:2328771:234719523471952348088894Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator1e-1377.4
NC_015567:2328782:234720623472062348099894Serratia sp. AS9 chromosome, complete genomeAraC family transcriptional regulator1e-1377.4
NC_011740:1595381:160192516019251602725801Escherichia fergusonii ATCC 35469, complete genomehypothetical protein, putative transcriptional activator for multiple antibiotic resistance1e-1273.9
NC_021066:5342127:534681253468125347165354Raoultella ornithinolytica B6, complete genomemultiple antibiotic resistance protein marA5e-1168.6
NC_011283:1178500:118002211800221180375354Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator1e-1067.4
NC_011749:34056:423404234042756417Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance1e-1067
NC_010939:405477:414597414597415013417Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 TetD protein1e-1067
CU928145:4950723:497605449760544976470417Escherichia coli 55989 chromosome, complete genomeputative operon control protein1e-1067
NC_011748:4950723:497605449760544976470417Escherichia coli 55989, complete genomeputative operon control protein1e-1067
NC_017328:1075535:110484811048481105264417Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator TetD1e-1067
NC_020418:448687:460865460865461281417Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1067
NC_012214:2019000:203667520366752037016342Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator, AraC family1e-0964.3
NC_015062:99969:113019113019113885867Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceAraC family transcriptional regulator1e-0963.9
NC_008563:1651270:165751016575101657899390Escherichia coli APEC O1, complete genomeMultiple antibiotic resistance protein MarA2e-0963.2
CP002185:1727493:173226217322621732645384Escherichia coli W, complete genomeDNA-binding transcriptional dual activator of multiple antibiotic resistance2e-0963.2
CU928160:1625535:163030416303041630687384Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual activator of multiple antibiotic resistance2e-0963.2
NC_010498:1615980:162917516291751629558384Escherichia coli SMS-3-5, complete genomemultiple antibiotic resistance protein MarA2e-0963.2
CP002516:2361628:237321023732102373593384Escherichia coli KO11, complete genometranscriptional regulator, AraC family2e-0963.2
NC_009800:1632585:163639516363951636778384Escherichia coli HS, complete genome2e-0963.2
NC_011415:1715644:172041317204131720796384Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional activator MarA2e-0963.2
NC_011741:1625535:163030416303041630687384Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional activator MarA2e-0963.2
NC_016902:2361628:237321023732102373593384Escherichia coli KO11FL chromosome, complete genomeAraC family transcriptional regulator2e-0963.2
NC_014618:2423661:242813424281342428517384Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_009778:1717458:174712117471211747495375Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-0962
NC_020064:1501441:150277515027751503230456Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain8e-0961.2
NC_010067:1414000:141607314160731416462390Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0861.2
NC_006905:4405301:443858744385874438910324Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional activator of superoxide response regulon (AraC/XylS family)2e-0860.5
NC_011094:4361238:439453043945304394853324Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding transcriptional regulator SoxS2e-0860.5
NC_010067:3310336:331747633174763317799324Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0860.1
NC_020181:3585898:360525036052503605579330Enterobacter aerogenes EA1509E, complete genomeRegulatory protein SoxS2e-0859.7
NC_020063:3352516:335776133577613358105345Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain4e-0858.9
NC_014837:33014:416424164242040399Pantoea sp. At-9b chromosome, complete genomeAraC family transcriptional regulator6e-0858.5
NC_020063:2480983:249158224915822492394813Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding domain-containing protein, AraC-type4e-0755.5
NC_009436:1141376:118085711808571181198342Enterobacter sp. 638, complete genomeAraC family transcriptional regulator9e-0754.7
NC_013592:3212834:323705732370573237398342Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family1e-0654.3
NC_016830:2247789:226051622605162261385870Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator3e-0652.8
NC_019897:73957:125481125481126383903Thermobacillus composti KWC4 chromosome, complete genomeDNA-binding domain-containing protein8e-0651.2