Pre_GI: BLASTP Hits

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Query: NC_009378:106193:133442 Yersinia pestis Pestoides F plasmid MT, complete sequence

Start: 133442, End: 133948, Length: 507

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008118:56777:973509735097856507Yersinia pestis Nepal516 plasmid pMT, complete sequenceantirestriction protein6e-91332
NC_005815:61148:870088700887514507Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative antirestriction protein6e-91332
NC_010158:92819:111002111002111508507Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceputative antirestriction protein6e-91332
NC_004838:51013:692086920869714507Yersinia pestis KIM plasmid pMT-1, complete sequenceantirestriction protein6e-91332
NC_015063:1:146881468815188501Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceantirestriction ArdA family protein6e-56216
NC_004663:44647:760097600976542534Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-restriction protein1e-28125
NC_015277:4358000:435805743580574358689633Sphingobacterium sp. 21 chromosome, complete genomeAntirestriction ArdA family protein2e-28124
NC_006347:1585191:158767015876701588203534Bacteroides fragilis YCH46, complete genomeputative anti-restriction protein7e-28123
NC_013037:6281164:630955763095576310114558Dyadobacter fermentans DSM 18053, complete genomeAntirestriction ArdA family protein7e-27119
NC_013037:1015210:104402910440291044586558Dyadobacter fermentans DSM 18053, complete genomeAntirestriction ArdA family protein2e-26118
NC_015177:1950461:196798819679881968521534Pedobacter saltans DSM 12145 chromosome, complete genomeAntirestriction ArdA family protein3e-26117
NC_015571:1065775:107150410715041072034531Porphyromonas gingivalis TDC60, complete genomeputative anti-restriction protein3e-1994.7
NC_019968:1235500:125711212571121257642531Prevotella dentalis DSM 3688 chromosome 2, complete sequenceantirestriction protein2e-1892
NC_016776:246648:270009270009270539531Bacteroides fragilis 638R, complete genomeputative anti-restriction protein3e-1581.3
NC_007677:1354500:137555013755501376125576Salinibacter ruber DSM 13855, complete genomeantirestriction protein9e-1372.8
NC_003919:1203405:121626112162611216893633Xanthomonas axonopodis pv. citri str. 306, complete genomeantirestriction protein7e-0959.7
NC_009089:581655:58476958476960656321795Clostridium difficile 630, complete genome1e-0755.5