Pre_GI: BLASTP Hits

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Query: NC_009140:60806:86719 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 86719, End: 87726, Length: 1008

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010554:2646806:2686260268626026872881029Proteus mirabilis HI4320, complete genomeplasmid pilus assembly2e-104379
NC_018012:1628364:1644030164403016450881059Thiocystis violascens DSM 198 chromosome, complete genomeTraU protein4e-89328
NC_010793:1811401:185462318546231855600978Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU4e-43175
NC_007722:2954876:2988396298839629894091014Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-42174
NC_010793:81219:100876100876101853978Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU3e-42172
NC_010793:721944:728135728135729112978Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU3e-42172
NC_010793:1723365:173453617345361735513978Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU3e-42172
NC_015580:1584078:1607305160730516083331029Novosphingobium sp. PP1Y, complete genomeconjugal transfer pilus assembly protein TraU2e-42172
NC_010699:1:1231912319133441026Erwinia tasmaniensis plasmid pET45, complete sequenceTraU protein5e-42171
NC_010793:1287877:129302512930251294002978Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU6e-42171
NC_009650:65732:851878518786176990Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,conjugal transfer pilus assembly protein TraU8e-41167
NC_010793:126111:131027131027131971945Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU6e-40164
NC_014305:126029:147080147080148072993Erwinia billingiae Eb661 plasmid pEB170, complete sequenceconjugal transfer pilus assembly protein1e-39163
NC_010814:243384:2839872839872850091023Geobacter lovleyi SZ, complete genomeTraU family protein2e-37156
NC_008609:206313:2456992456992467211023Pelobacter propionicus DSM 2379, complete genomeTraU family protein3e-37155
NC_011035:829945:8758068758068769241119Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein TraU2e-36153
NC_014228:2270000:229946422994642299676213Xenorhabdus nematophila ATCC 19061, complete genome3e-34145
NC_009998:62000:8850885098631014Shewanella baltica OS195 plasmid pS19501, complete sequenceTraU family protein2e-33143
NC_008607:144000:146125146125147114990Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceTraU family protein2e-31137
NC_010793:416849:431726431726432409684Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU2e-28126
NC_010793:496500:506728506728507411684Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU2e-28126
NC_010793:1628500:163669516366951637378684Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU2e-28126
NC_007759:1740702:1753532175353217545511020Syntrophus aciditrophicus SB, complete genomeconjugal DNA transfer protein9e-28124
NC_009488:605625:619568619568620269702Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein6e-28124
NC_015976:2150676:2178787217878721798001014Sphingobium sp. SYK-6, complete genomeconjugal transfer protein TraU8e-25114
NC_014836:1606587:1609449160944916104621014Desulfurispirillum indicum S5 chromosome, complete genomeTraU family protein1e-24114
NC_010793:1508974:152441615244161525003588Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU2e-24113
NC_010793:1922000:194865719486571949244588Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraU2e-24113
NC_014228:2270000:229971222997122299972261Xenorhabdus nematophila ATCC 19061, complete genome1e-1274.3
NC_007794:2304768:2304768230476823058831116Novosphingobium aromaticivorans DSM 12444, complete genomehypothetical protein7e-0858.2