Pre_GI: BLASTP Hits

Some Help

Query: NC_009140:60806:86051 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 86051, End: 86722, Length: 672

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:2270000:230034223003422301013672Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-113407
NC_015185:485866:5107415107415126931953Desulfurobacterium thermolithotrophum DSM 11699 chromosome,diguanylate cyclase/phosphodiesterase4e-1375.1
NC_013216:1748241:1761679176167917647443066Desulfotomaculum acetoxidans DSM 771, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)4e-1374.7
NC_010730:741842:760100760100760891792Sulfurihydrogenibium sp. YO3AOP1, complete genomediguanylate phosphodiesterase1e-1273.2
NC_007802:3252300:3264319326431932659831665Jannaschia sp. CCS1, complete genomediguanylate cyclase/phosphodiesterase3e-1272
NC_011001:163813:1826301826301841411512Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative diguanylate phosphodiesterase7e-1270.9
NC_014910:4207227:4224497422449742272622766Alicycliphilus denitrificans BC chromosome, complete genomediguanylate cyclase6e-1270.9
NC_008253:3122148:313123931312393132021783Escherichia coli 536, complete genomehypothetical protein (EAL domain)1e-1170.5
NC_017955:3731480:3761890376189037637461857Modestobacter marinus, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)2e-1168.9
NC_012438:192065:2034542034542053701917Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomediguanylate cyclase/phosphodiesterase3e-1168.9
NC_017187:325229:3309553309553325711617Arcobacter butzleri ED-1, complete genomediguanylate cyclase3e-1168.9
NC_015873:1411718:1415143141514314180162874Megasphaera elsdenii DSM 20460, complete genomediguanylate phosphodiesterase4e-1168.6
NC_015682:205900:2376092376092392551647Thermodesulfobacterium sp. OPB45 chromosome, complete genomediguanylate cyclase/phosphodiesterase2e-1065.5
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)4e-1065.1
NC_013717:5726:200022000220844843Citrobacter rodentium ICC168 plasmid pCROD1, complete sequencehypothetical protein1e-0963.5
NC_007511:3371319:3374684337468433762521569Burkholderia sp. 383 chromosome 2, complete sequencediguanylate phosphodiesterase (EAL domain)2e-0962.4
NC_015572:65597:6559765597697574161Methylomonas methanica MC09 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase2e-0962.4
NC_015850:217495:2418422418422445832742Acidithiobacillus caldus SM-1 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase3e-0962
NC_015968:2195645:2228558222855822305191962Enterobacter asburiae LF7a chromosome, complete genomediguanylate cyclase/phosphodiesterase4e-0961.6
NC_008253:1228485:124031012403101241161852Escherichia coli 536, complete genomehypothetical protein5e-0961.2
NC_011742:1221416:123458012345801235431852Escherichia coli S88 chromosome, complete genome5e-0961.2
NC_011745:1287714:129964112996411300492852Escherichia coli ED1a chromosome, complete genome5e-0961.2
NC_012691:241404:2423132423132446072295Tolumonas auensis DSM 9187, complete genomediguanylate cyclase/phosphodiesterase with extracellular sensor5e-0961.2
NC_004547:1174650:1209940120994012115621623Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable transcriptional regulator5e-0961.2
NC_015387:1278471:1285685128568512885522868Marinithermus hydrothermalis DSM 14884 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)5e-0961.2
NC_009436:1679265:1687154168715416890821929Enterobacter sp. 638, complete genomediguanylate cyclase/phosphodiesterase1e-0860.1
NC_009925:3344894:3361646336164633645402895Acaryochloris marina MBIC11017, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor1e-0860.1
NC_017955:3731480:3827265382726538290401776Modestobacter marinus, complete genomediguanylate cyclase/phosphodiesterase1e-0860.1
NC_013457:1703201:1705130170513017066021473Vibrio sp. Ex25 chromosome 2, complete genomeRtn protein1e-0860.1
CP002185:1298675:1310137131013713117021566Escherichia coli W, complete genomeconserved inner membrane protein2e-0859.7
NC_008313:1:3711037110397522643Ralstonia eutropha H16 chromosome 1, complete sequencepredicted signal transduction protein containing PAS, GGDEF and EAL domains2e-0859.7
NC_011751:1446073:1464032146403214651201089Escherichia coli UMN026 chromosome, complete genome2e-0859.7
NC_011741:1232510:1244014124401412455371524Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-0859.7
CU928160:1232510:1244014124401412455371524Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein2e-0859.7
NC_012947:2566754:2575375257537525769401566Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completediguanylate phosphodiesterase2e-0859.7
NC_012967:1205985:1217489121748912190121524Escherichia coli B str. REL606 chromosome, complete genomeinner membrane protein2e-0859.7
NC_010468:2699000:2707521270752127090861566Escherichia coli ATCC 8739, complete genomediguanylate phosphodiesterase2e-0859.7
CP002516:2786000:2794146279414627956691524Escherichia coli KO11, complete genomediguanylate phosphodiesterase1e-0859.7
NC_016902:2786000:2794146279414627956691524Escherichia coli KO11FL chromosome, complete genomediguanylate phosphodiesterase1e-0859.7
NC_011748:1300863:1312367131236713138901524Escherichia coli 55989, complete genomeconserved hypothetical protein; putative inner membrane protein1e-0859.7
NC_013361:1634226:1644356164435616458791524Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-0859.7
NC_004431:1443968:145712614571261457977852Escherichia coli CFT073, complete genomehypothetical protein1e-0859.7
NC_009800:1254409:1265735126573512673001566Escherichia coli HS, complete genomecyclic diguanylate phosphodiesterase (EAL) domain protein1e-0859.7
NC_013364:1477248:1512169151216915136921524Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-0859.7
NC_013353:1339263:1350767135076713522901524Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0859.7
NC_011415:1273551:1285054128505412865771524Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-0859.7
AP010958:1339263:1350767135076713522901524Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved inner membrane protein1e-0859.7
CU928145:1300863:1312367131236713138901524Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein1e-0859.7
NC_013941:1460144:1469597146959714711201524Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCyclic diguanylate phosphodiesterase (EAL) domain protein2e-0859.3
NC_009720:5079048:5099765509976551020412277Xanthobacter autotrophicus Py2, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-0859.3
NC_011750:1978801:1983860198386019853831524Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-0858.9
NC_010498:1995500:2002860200286020043201461Escherichia coli SMS-3-5, complete genomecyclic diguanylate phosphodiesterase domain-containing protein2e-0858.9
NC_011740:2737467:2745180274518027467211542Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein3e-0858.5
NC_007519:3355768:3378588337858833813952808Desulfovibrio alaskensis G20 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)3e-0858.5
NC_017047:2079368:2114443211444321158011359Rahnella aquatilis HX2 chromosome, complete genomediguanylate phosphodiesterase4e-0858.2
NC_010473:1245284:1256792125679212583151524Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein4e-0858.2
NC_000913:1188999:1216551121655112180741524Escherichia coli K12, complete genomeconserved inner membrane protein4e-0858.2
AC_000091:1191353:1218905121890512204281524Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein4e-0858.2
NC_012759:1093764:1105272110527211067951524Escherichia coli BW2952 chromosome, complete genomehypothetical protein4e-0858.2
NC_009801:1296488:1307950130795013095151566Escherichia coli E24377A, complete genomecyclic diguanylate phosphodiesterase (EAL) domain protein5e-0857.8
NC_008313:1:2447724477255381062Ralstonia eutropha H16 chromosome 1, complete sequenceputative signal transduction protein5e-0857.8
NC_007498:3540945:3558448355844835595511104Pelobacter carbinolicus DSM 2380, complete genomesensory box/GGDEF family protein6e-0857.8
NC_010804:996837:1003814100381410063962583Burkholderia multivorans ATCC 17616 chromosome 1, completesignal transduction GGDEF/EAL domain protein7e-0857.4
NC_010084:2484000:2518152251815225209592808Burkholderia multivorans ATCC 17616 chromosome 1, completePAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase8e-0857.4
NC_020541:2191600:2207090220709022087751686Rhodanobacter sp. 2APBS1, complete genomeEAL domain-containing protein1e-0757
NC_020541:2264521:2275034227503422767191686Rhodanobacter sp. 2APBS1, complete genomeEAL domain-containing protein1e-0757
NC_015850:169180:1953721953721974172046Acidithiobacillus caldus SM-1 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase1e-0757
NC_008576:3331825:3339175333917533425313357Magnetococcus sp. MC-1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0757
NC_010125:3771910:3782214378221437851382925Gluconacetobacter diazotrophicus PAl 5, complete genomeputative signalling protein, GGDEF family1e-0756.6
NC_016818:2836851:2841473284147328429961524Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeEAL domain-containing protein2e-0756.2
NC_015663:549425:5814285814285828491422Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-0755.5
NC_017093:835260:8582698582698607642496Actinoplanes missouriensis 431, complete genomediguanylate cyclase3e-0755.5
NC_010505:4676403:4680332468033246820561725Methylobacterium radiotolerans JCM 2831, complete genomediguanylate cyclase/phosphodiesterase4e-0754.7
NC_008563:1217804:123110012311001231819720Escherichia coli APEC O1, complete genomehypothetical protein5e-0754.7
NC_014834:959986:1002158100215810039751818Rhodopseudomonas palustris DX-1 chromosome, complete genomePAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase5e-0754.7
NC_004741:2593012:2593012259301225965213510Shigella flexneri 2a str. 2457T, complete genome6e-0754.3
NC_015186:2197236:2235570223557022379242355Acidiphilium multivorum AIU301, complete genomeputative signaling protein7e-0754.3
NC_007802:2026500:2036403203640320381121710Jannaschia sp. CCS1, complete genomediguanylate cyclase/phosphodiesterase7e-0754.3
NC_015850:169180:2058762058762079482073Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein9e-0753.9
NC_015942:447308:4638614638614664882628Acidithiobacillus ferrivorans SS3 chromosome, complete genomediguanylate cyclase/phosphodiesterase8e-0753.9
NC_007404:359764:3679023679023697221821Thiobacillus denitrificans ATCC 25259, complete genomePutative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)8e-0753.9
NC_014305:66500:8477584775864061632Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDiguanylate cyclase/phosphodiesterase8e-0753.9
NC_009664:570768:5924065924065940191614Kineococcus radiotolerans SRS30216, complete genomediguanylate cyclase/phosphodiesterase7e-0753.9
NC_014758:1573023:1590995159099515943273333Calditerrivibrio nitroreducens DSM 19672 chromosome, completediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)1e-0653.5
NC_015690:1542061:1548207154820715500301824Paenibacillus mucilaginosus KNP414 chromosome, complete genomesensory box/GGDEF family protein1e-0653.5
NC_015499:417896:4275894275894301322544Thermodesulfobium narugense DSM 14796 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0653.5
NC_010172:3712000:3717390371739037193932004Methylobacterium extorquens PA1, complete genomediguanylate cyclase1e-0653.5
NC_016935:2069562:2075708207570820775161809Paenibacillus mucilaginosus 3016 chromosome, complete genomesensory box/GGDEF family protein1e-0653.5
NC_012988:4075429:4083312408331240853392028Methylobacterium extorquens DM4, complete genomediguanylate cyclase9e-0753.5
NC_013959:826868:8672508672508700332784Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)1e-0653.1
NC_016745:1892500:1913200191320019149571758Oceanimonas sp. GK1 chromosome, complete genomesignal protein1e-0653.1
NC_012808:3711806:3717633371763337194981866Methylobacterium extorquens AM1, complete genomeputative membrane protein, diguanylate cyclase (GGDEF) domain1e-0653.1
NC_015873:450593:4511354511354558234689Megasphaera elsdenii DSM 20460, complete genomediguanylate cyclase/phosphodiesterase2e-0652.8
NC_009784:253852:2538522538522561792328Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein2e-0652.8
NC_007484:3035068:3037810303781030396001791Nitrosococcus oceani ATCC 19707, complete genomePAS sensor diguanylate cyclase/phophodiesterase2e-0652.8
NC_011080:383441:3915943915943931441551Salmonella enterica subsp. enterica serovar Newport str. SL254,putative rtn protein2e-0652.8
NC_008043:86470:1064471064471084802034Silicibacter sp. TM1040 mega plasmid, complete sequencediguanylate cyclase/phosphodiesterase2e-0652.4
NC_014006:344331:3649573649573670172061Sphingobium japonicum UT26S chromosome 1, complete genomeputative signal transduction protein3e-0652.4
NC_019940:3089884:3104255310425531085444290Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein3e-0652.4
NC_007947:1229807:1229807122980712319752169Methylobacillus flagellatus KT, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)3e-0652
NC_014541:643604:6436046436046460722469Ferrimonas balearica DSM 9799 chromosome, complete genomediguanylate cyclase/phosphodiesterase3e-0652
NC_014315:1463383:1480617148061714826952079Nitrosococcus watsoni C-113 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase4e-0651.6
NC_007778:5079500:5082352508235250852282877Rhodopseudomonas palustris HaA2, complete genomediguanylate cyclase/phosphodiesterase4e-0651.6
NC_009831:2884851:2907329290732929095542226Shewanella sediminis HAW-EB3, complete genomehypothetical protein4e-0651.6
NC_011601:2806392:2807972280797228102152244Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-0651.2
NC_018868:2935580:2940182294018229424552274Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomesignal protein5e-0651.2
NC_003272:5040500:5061315506131550630121698Nostoc sp. PCC 7120, complete genomehypothetical protein8e-0650.8
NC_015963:4500:1766517665192241560Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencediguanylate phosphodiesterase6e-0650.8
NC_008573:195317:199857199857200657801Shewanella sp. ANA-3 plasmid 1, complete sequencediguanylate phosphodiesterase6e-0650.8
NC_010501:2609567:260956726095672610556990Pseudomonas putida W619, complete genomediguanylate phosphodiesterase9e-0650.4
NC_015733:5909821:592923959292395930228990Pseudomonas putida S16 chromosome, complete genomediguanylate phosphodiesterase9e-0650.4
NC_020409:393329:4195054195054216432139Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeResponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)1e-0550.4