Pre_GI: BLASTP Hits

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Query: NC_009140:60806:84789 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 84789, End: 86054, Length: 1266

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:2270000:2301010230101023022181209Xenorhabdus nematophila ATCC 19061, complete genomeputative pilus assembly protein0761
NC_010554:2646806:2687272268727226883991128Proteus mirabilis HI4320, complete genomeplasmid pilus assembly protein1e-55217
NC_018012:1628364:1645091164509116463051215Thiocystis violascens DSM 198 chromosome, complete genomeType-F conjugative transfer system pilin assembly protein2e-54213
NC_009650:65732:841338413384759627Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,conjugal transfer pilus assembly protein TraW3e-0860.5
NC_008607:144000:147659147659148261603Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceconserved hypothetical cytosolic protein3e-0860.1
NC_010814:243384:285460285460286116657Geobacter lovleyi SZ, complete genomeconserved hypothetical cytosolic protein2e-0653.9