Pre_GI: BLASTP Hits

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Query: NC_009140:60806:81520 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 81520, End: 83967, Length: 2448

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010554:2646806:2689243268924326916422400Proteus mirabilis HI4320, complete genomeplasmid pilus assembly protein0833
NC_018012:1628364:1647227164722716488881662Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein1e-152541
NC_009140:60806:601026010260809708Salmonella enterica enterica sv Newport str. SL254, complete2e-140500
NC_014228:2270000:230309723030972303849753Xenorhabdus nematophila ATCC 19061, complete genome5e-132472
NC_011035:829945:8787078787078812832577Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein TraC2e-90333
NC_007759:1740702:1744023174402317465572535Syntrophus aciditrophicus SB, complete genomesex pilus assembly protein3e-76286
NC_010814:243384:2914532914532939002448Geobacter lovleyi SZ, complete genomesex pilus assembly protein9e-76285
NC_008609:251608:2516082516082540552448Pelobacter propionicus DSM 2379, complete genomesex pilus assembly protein4e-74280
NC_010793:1811401:1851185185118518536742490Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC1e-66255
NC_007722:2993852:2991312299131229938552544Erythrobacter litoralis HTCC2594, complete genomeputative inner-membrane protein traC8e-64245
NC_015377:34445:3444534445370422598Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein8e-61235
NC_014228:2270000:230393123039312304296366Xenorhabdus nematophila ATCC 19061, complete genome7e-59229
NC_008607:144000:1522441522441546942451Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequencesex pilus assembly protein5e-52206
NC_010793:126111:1341671341671362152049Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC5e-51203
NC_015976:2150676:2174345217434521768672523Sphingobium sp. SYK-6, complete genometype IV secretory pathway VirB4 component2e-50201
NC_014305:126029:1427841427841453722589Erwinia billingiae Eb661 plasmid pEB170, complete sequenceconjugal transfer ATP-binding protein2e-41171
NC_010793:1723365:1731100173110017331122013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC3e-41170
NC_010793:81219:9737297372994532082Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC3e-41170
NC_010793:721944:7305357305357326162082Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC3e-41170
NC_010699:1:86748674113222649Erwinia tasmaniensis plasmid pET45, complete sequenceTraC protein3e-36154
NC_009650:65732:8110581105837442640Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,conjugal transfer ATP-binding protein TraC1e-35152
NC_009998:62000:1092410924135122589Shewanella baltica OS195 plasmid pS19501, complete sequencetype-IV secretion system protein TraC2e-35151
NC_009999:38832:3883238832414202589Shewanella baltica OS195 plasmid pS19502, complete sequencetype-IV secretion system protein TraC3e-35150
NC_010793:668500:680535680535681497963Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC7e-31136
NC_010793:1508974:1526067152606715279381872Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC4e-26120
NC_010793:1922000:1945791194579119475931803Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC4e-26120
NC_010793:496500:5036225036225054091788Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC7e-25116
NC_015844:3580591:3589954358995435922932340Zobellia galactanivorans, complete genomeconjugative transposon protein TraG2e-22108
NC_009441:4218434:4232948423294842353832436Flavobacterium johnsoniae UW101 chromosome, complete genomeType IV secretory pathway VirB4 components-like protein8e-21103
NC_019012:61360:6240162401649952595Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequenceProtein traC2e-20102
NC_019904:5207309:5218691521869152211592469Echinicola vietnamensis DSM 17526 chromosome, complete genomeconjugation system ATPase, TraG family8e-21102
NC_009614:2034265:2052760205276020552942535Bacteroides vulgatus ATCC 8482 chromosome, complete genomeconjugate transposon protein1e-1895.9
NC_013131:7889127:7910120791012079119461827Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirB4 protein-like protein2e-1895.5
NC_009615:4693164:4721200472120047237252526Parabacteroides distasonis ATCC 8503 chromosome, complete genomeconjugate transposon protein2e-1894.7
NC_016582:10159486:1016391410163914101657731860Streptomyces bingchenggensis BCW-1 chromosome, complete genometype IV secretory pathway VirB4 protein-like protein3e-1894.4
NC_014964:2272413:2285184228518422870191836Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completetype IV secretory pathway VirB4 components-like protein5e-1893.6
NC_014538:2158131:2173861217386121756961836Thermoanaerobacter sp. X513 chromosome, complete genometype IV secretory pathway VirB4 components-like protein7e-1893.2
NC_014974:1539950:1559387155938715618492463Thermus scotoductus SA-01 chromosome, complete genomehypothetical protein3e-1791.3
NC_013131:9903320:9948989994898999507761788Catenulispora acidiphila DSM 44928, complete genometype IV secretory pathway VirB4 protein-like protein3e-1790.9
NC_009441:5248791:5259914525991452623732460Flavobacterium johnsoniae UW101 chromosome, complete genomeType IV secretory pathway VirB4 components-like protein8e-1789.7
NC_015164:1260500:1266184126618412686972514Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugation system ATPase, TraG family9e-1789.7
NC_010321:35855:5603356033578171785Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeType IV secretory pathway VirB4 components-like protein1e-1689.4
NC_014964:35862:5604056040578241785Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completetype IV secretory pathway VirB4 components-like protein1e-1689.4
NC_015312:1265797:1287412128741212893221911Pseudonocardia dioxanivorans CB1190 chromosome, complete genometype IV secretory pathway VirB4 components-like protein2e-1688.6
NC_015311:2489176:2507140250714025096532514Prevotella denticola F0289 chromosome, complete genomeTraG family conjugation system ATPase2e-1688.2
NC_014041:3715000:3726977372697737294452469Zunongwangia profunda SM-A87 chromosome, complete genomeType IV secretory pathway VirB4 components-like protein2e-1688.2
NC_016610:1310275:1347745134774513502312487Tannerella forsythia ATCC 43037 chromosome, complete genomeconjugation system ATPase, TraG family3e-1687.8
NC_014371:889043:8962408962408987532514Prevotella melaninogenica ATCC 25845 chromosome chromosome II,conjugation system ATPase, TraG family9e-1686.3
NC_015311:1827000:1847192184719218497052514Prevotella denticola F0289 chromosome, complete genomeTraG family conjugation system ATPase9e-1686.3
NC_015164:493159:5319545319545346742721Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugation system ATPase, TraG family2e-1585.5
NC_015177:1950461:1957979195797919604862508Pedobacter saltans DSM 12145 chromosome, complete genometype IV secretory pathway VirB4 components-like protein2e-1585.1
NC_006347:1585191:1596355159635515988682514Bacteroides fragilis YCH46, complete genomeconserved protein found in conjugate transposon3e-1584.7
NC_015177:1822000:1832448183244818349522505Pedobacter saltans DSM 12145 chromosome, complete genometype IV secretory pathway VirB4 components-like protein3e-1584.7
NC_015501:1941851:1963805196380519663212517Porphyromonas asaccharolytica DSM 20707 chromosome, completeconjugation system ATPase, TraG family3e-1584.7
NC_015164:2961906:2970279297027929727832505Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugation system ATPase, TraG family4e-1584
NC_006347:112500:1274141274141299182505Bacteroides fragilis YCH46, complete genomeTraG4e-1584
NC_016776:1609476:1621977162197716243732397Bacteroides fragilis 638R, complete genomehypothetical protein6e-1583.6
NC_004663:6223442:6252460625246062547782319Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved protein found in conjugate transposon1e-1482.4
NC_009437:2815500:2832379283237928341511773Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeAAA ATPase1e-1482.4
NC_010793:1287877:129102012910201291601582Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC2e-1482
NC_015571:1030527:1059222105922210617082487Porphyromonas gingivalis TDC60, complete genomeconjugative transposon protein TraG2e-1482
NC_016776:5174606:5194576519457651970772502Bacteroides fragilis 638R, complete genomehypothetical protein2e-1482
NC_015277:4358000:4369849436984943723562508Sphingobacterium sp. 21 chromosome, complete genomeconjugation system ATPase, TraG family2e-1482
NC_016776:246648:2554372554372579232487Bacteroides fragilis 638R, complete genomeputative conjugative transposon protein traG2e-1481.6
NC_003228:2010643:2053558205355820560592502Bacteroides fragilis NCTC 9343, complete genomeputative conserved protein found in conjugate transposon2e-1481.6
NC_013731:55627:6803168031705682538Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencehypothetical protein4e-1480.9
NC_014721:2201790:2223973222397322258381866Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeaaa atpase6e-1480.1
NC_018866:27878:4555845558478942337Dehalobacter sp. DCA chromosome, complete genomehypothetical protein2e-1379
NC_014652:379833:3813053813053831641860Caldicellulosiruptor hydrothermalis 108 chromosome, completeaaa atpase1e-1379
NC_015603:1:4634463466522019Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequenceconjugal transfer protein Tra1e-1379
NC_014212:501449:5014495014495039802532Meiothermus silvanus DSM 9946 chromosome, complete genometype IV secretory pathway VirB4 component, ATPase TraC4e-1377.4
NC_015738:3042000:3063295306329530656042310Eggerthella sp. YY7918, complete genomehypothetical protein6e-1377
NC_018867:10238:2915829158314882331Dehalobacter sp. CF chromosome, complete genomeTrsE-like protein2e-1275.5
NC_015571:2044000:2074594207459420771192526Porphyromonas gingivalis TDC60, complete genomeconjugative transposon protein TraG3e-1274.3
NC_002950:1511955:1556012155601215585372526Porphyromonas gingivalis W83, complete genomeconjugative transposon protein TraG4e-1273.9
NC_010793:416849:4337284337284348821155Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC5e-1273.6
NC_008023:1070986:1077345107734510797742430Streptococcus pyogenes MGAS2096, complete genomeTRSE protein5e-1273.6
NC_014391:1910273:1908453190845319102761824Micromonospora aurantiaca ATCC 27029 chromosome, complete genometype IV secretory pathway VirB4 protein-like protein7e-1273.2
NC_017177:192933:2062232062232081451923Clostridium difficile BI1, complete genomeType IV secretory pathway VirB4 component-like protein1e-1172.4
NC_015434:2460053:2462503246250324642061704Verrucosispora maris AB-18-032 chromosome, complete genometype iv secretory pathway virb4 protein-like protein2e-1172
NC_009921:8147947:8180935818093581829081974Frankia sp. EAN1pec, complete genomeType IV secretory pathway VirB4 protein-like protein2e-1172
NC_004668:2198027:2244004224400422464812478Enterococcus faecalis V583, complete genometraE protein, putative7e-1170.1
NC_012781:3315614:3349227334922733514882262Eubacterium rectale ATCC 33656, complete genomehypothetical protein6e-1170.1
NC_013926:1009718:1014731101473110164311701Aciduliprofundum boonei T469 chromosome, complete genomeType IV secretory pathway VirB4 protein-like protein4e-1067.4
NC_014815:6616500:6688344668834466900951752Micromonospora sp. L5 chromosome, complete genometype iv secretory pathway virb4 protein-like protein5e-1067
NC_003106:1313692:1320561132056113224201860Sulfolobus tokodaii str. 7, complete genomehypothetical protein8e-1066.6
NC_014624:224213:2242132242132265372325Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0965.9
NC_012691:2614603:2667249266724926701252877Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-0965.9
NC_013037:1072266:1091104109110410935282425Dyadobacter fermentans DSM 18053, complete genome2e-0965.5
NC_014246:57021:8641886418886402223Mobiluncus curtisii ATCC 43063 chromosome, complete genometransfer complex protein2e-0965.1
NC_010170:1498253:1544570154457015463811812Bordetella petrii, complete genomepseudogene3e-0964.7
NC_015977:3424178:3501261350126135036392379Roseburia hominis A2-183 chromosome, complete genomeTRSE protein3e-0964.7
NC_016630:1247251:1288570128857012909632394Filifactor alocis ATCC 35896 chromosome, complete genometype IV conjugative transfer system protein TraE5e-0963.9
NC_016630:434500:4425444425444450062463Filifactor alocis ATCC 35896 chromosome, complete genometype IV conjugative transfer system protein TraE8e-0963.2
NC_016791:1620858:1634019163401916358511833Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein8e-0963.2
NC_016830:3869572:3909702390970239123592658Pseudomonas fluorescens F113 chromosome, complete genomeprotein VirB49e-0962.8
NC_008781:2611702:2636646263664626390902445Polaromonas naphthalenivorans CJ2, complete genomeCagE, TrbE, VirB component of type IV transporter system4e-0860.8
NC_009706:238160:2522582522582546212364Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-0860.5
NC_011837:238160:2522582522582545222265Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-0860.1
NC_012471:719000:7286357286357310642430Streptococcus equi subsp. equi 4047, complete genomeconjugal transfer protein8e-0859.7
NC_013192:1033177:1054164105416410566472484Leptotrichia buccalis DSM 1135, complete genomeCagE TrbE VirB component of type IV transporter system1e-0759.3
NC_015437:697051:7258257258257282902466Selenomonas sputigena ATCC 35185 chromosome, complete genomeAAA ATPase1e-0759.3
NC_009089:1283000:1306661130666113090902430Clostridium difficile 630, complete genomeputative conjugal transfer protein1e-0759.3
NC_013164:67500:7061170611728542244Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequenceputative type IV secretory pathway VirB4 protein2e-0758.9
NC_013316:2033906:2089315208931520917082394Clostridium difficile R20291, complete genomeputative conjugal transfer protein2e-0758.2
NC_009089:478328:4870544870544894472394Clostridium difficile 630, complete genomeputative conjugal transfer protein2e-0758.2
NC_009614:2723262:2748631274863127502231593Bacteroides vulgatus ATCC 8482 chromosome, complete genomeconjugate transposon protein2e-0758.2
NC_016749:1371997:1394027139402713963752349Streptococcus macedonicus ACA-DC 198, complete genometrsE-like protein6e-0757
NC_011898:3658372:3663030366303036648621833Clostridium cellulolyticum H10, complete genomehypothetical protein6e-0757
NC_012471:1197534:1259693125969312621192427Streptococcus equi subsp. equi 4047, complete genomeconjugal transfer protein6e-0757
NC_012660:2045398:2102000210200021047502751Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-0756.6
NC_014961:445717:4642054642054659891785Desulfurococcus mucosus DSM 2162 chromosome, complete genomeputative TrbE protein8e-0756.6
NC_013849:376676:3905033905033923171815Ferroglobus placidus DSM 10642 chromosome, complete genomeType IV secretory pathway VirB4 protein-like protein2e-0655.1
NC_015164:3997743:4003639400363940063592721Bacteroides salanitronis DSM 18170 chromosome, complete genomeconjugation system ATPase, TraG family2e-0655.1
NC_004116:1276791:1300833130083313031632331Streptococcus agalactiae 2603V/R, complete genomeTn5252, Orf264e-0654.3
NC_014370:885937:8957048957048985892886Prevotella melaninogenica ATCC 25845 chromosome chromosome I,conjugation system ATPase, TraG family6e-0653.5
NC_012781:2552723:2583081258308125848381758Eubacterium rectale ATCC 33656, complete genomehypothetical protein7e-0653.5
NC_012781:700226:7139217139217156781758Eubacterium rectale ATCC 33656, complete genomehypothetical protein7e-0653.5