Pre_GI: BLASTP Hits

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Query: NC_009140:60806:70781 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 70781, End: 72043, Length: 1263

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:4077293:4090541409054140918031263Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase0784
NC_016845:1285435:1313677131367713149391263Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase0784
NC_019903:2708500:2708546270854627098081263Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transposase family protein0784
NC_019903:1058657:1060488106048810617501263Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transposase family protein0784
NC_018867:10238:6956969569708401272Dehalobacter sp. CF chromosome, complete genometransposase InsC3 for insertion sequence ISEc90673
NC_012108:4417483:4437879443787944391771299Desulfobacterium autotrophicum HRM2, complete genometransposase (IS4 family protein)3e-41169
NC_009140:60806:702867028670543258Salmonella enterica enterica sv Newport str. SL254, complete3e-34146
NC_016610:2077603:2082346208234620836861341Tannerella forsythia ATCC 43037 chromosome, complete genometransposase, IS4 family9e-24111
NC_016610:2880652:2883074288307428844141341Tannerella forsythia ATCC 43037 chromosome, complete genometransposase, IS4 family9e-24111
NC_016610:61661:7112671126724661341Tannerella forsythia ATCC 43037 chromosome, complete genometransposase, IS4 family9e-24111
NC_019897:700332:7472337472337485341302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein1e-22108
NC_019897:2004050:2017742201774220190431302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein2e-22107
NC_019897:700332:7111217111217123861266Thermobacillus composti KWC4 chromosome, complete genome7e-21102
NC_019897:3613830:3614555361455536158561302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein7e-21102
NC_019897:3669888:3683333368333336846341302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein5e-21102
NC_019897:73957:98902989021002031302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein5e-21102
NC_019897:2004050:2013445201344520147461302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein8e-21101
NC_019897:2959002:2965686296568629669871302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein9e-21101
NC_019897:4131337:4141242414124241425431302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein3e-20100
NC_019897:3669888:3681677368167736829781302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein3e-20100
NC_016023:267581:2754772754772767901314Bacillus coagulans 36D1 chromosome, complete genometransposase IS4 family protein5e-2099.4
NC_019897:329945:3591983591983604991302Thermobacillus composti KWC4 chromosome, complete genometransposase family protein4e-2099.4
NC_015634:2547144:2556344255634425575101167Bacillus coagulans 2-6 chromosome, complete genometransposase IS4 family protein6e-2099
NC_016023:1923170:1946800194680019481041305Bacillus coagulans 36D1 chromosome, complete genometransposase IS4 family protein7e-2098.6
NC_019897:700332:7193347193347206381305Thermobacillus composti KWC4 chromosome, complete genometransposase family protein2e-1997.4
NC_016023:1419217:1426465142646514277691305Bacillus coagulans 36D1 chromosome, complete genometransposase IS4 family protein3e-1996.7
NC_019897:3613830:3620486362048636219551470Thermobacillus composti KWC4 chromosome, complete genometransposase family protein6e-1892.4
NC_009253:897684:9328009328009342541455Desulfotomaculum reducens MI-1 chromosome, complete genometransposase, IS4 family protein1e-1791.3
NC_019897:4014485:4036267403626740377361470Thermobacillus composti KWC4 chromosome, complete genometransposase family protein8e-1788.6
NC_019897:128610:1609221609221623911470Thermobacillus composti KWC4 chromosome, complete genometransposase family protein8e-1788.6
NC_020911:2998000:2999773299977330011281356Octadecabacter antarcticus 307, complete genomeIS1380-family transposase2e-1687.4
NC_009442:908507:9301039301039314221320Streptococcus suis 05ZYH33 chromosome, complete genometransposase1e-1584.3
NC_003911:480202:4914904914904928391350Silicibacter pomeroyi DSS-3, complete genomeISSpo2, transposase2e-1583.6
NC_015634:2991669:3002216300221630035891374Bacillus coagulans 2-6 chromosome, complete genometransposase IS4 family protein3e-1583.6
NC_009720:750612:7628097628097641641356Xanthobacter autotrophicus Py2, complete genometransposase IS4 family protein9e-1478.6
NC_016052:842762:8860238860238873451323Tetragenococcus halophilus NBRC 12172, complete genomeputative transposase for insertion sequence element2e-1377
NC_013440:1436784:1469666146966614710841419Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein4e-1376.3
NC_008554:2469156:2484856248485624860491194Syntrophobacter fumaroxidans MPOB, complete genometransposase, IS4 family protein5e-1375.9
NC_008554:156744:1656221656221668151194Syntrophobacter fumaroxidans MPOB, complete genometransposase, IS4 family protein5e-1375.9
NC_008554:4586543:4592650459265045938431194Syntrophobacter fumaroxidans MPOB, complete genometransposase, IS4 family protein5e-1375.9
NC_013440:1580802:1598814159881416002321419Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein7e-1375.5
NC_008554:4586543:4590232459023245914251194Syntrophobacter fumaroxidans MPOB, complete genometransposase, IS4 family protein8e-1375.5
NC_013440:1879306:1898893189889319003111419Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein8e-1375.1
NC_015942:2316354:2319952231995223214751524Acidithiobacillus ferrivorans SS3 chromosome, complete genometransposase IS4 family protein9e-1271.6
NC_007512:2024880:2068734206873420701311398Pelodictyon luteolum DSM 273, complete genomehypothetical protein3e-1067
NC_010831:2078329:2090661209066120920581398Chlorobium phaeobacteroides BS1, complete genomehypothetical protein3e-1067
NC_010831:1224000:1245054124505412464511398Chlorobium phaeobacteroides BS1, complete genomehypothetical protein3e-1067
NC_008740:443274:4942404942404955411302Marinobacter aquaeolei VT8, complete genometransposase, IS4 family protein7e-1065.5
NC_008639:2968000:2998683299868330000081326Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein4e-0963.2
NC_019892:2684793:2698955269895527003791425Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein5e-0962.8
NC_010831:2078329:2114442211444221158421401Chlorobium phaeobacteroides BS1, complete genomehypothetical protein7e-0962
NC_008639:2968000:3014774301477430161711398Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein1e-0861.6
NC_015634:2595500:262130426213042622155852Bacillus coagulans 2-6 chromosome, complete genometransposase IS4 family protein4e-0859.7
NC_009663:2023941:2023941202394120252631323Sulfurovum sp. NBC37-1, complete genometransposase4e-0859.7
NC_009663:738846:7463657463657476871323Sulfurovum sp. NBC37-1, complete genometransposase4e-0859.7
NC_014370:885937:8872438872438885441302Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein1e-0758.2
NC_019897:700332:745125745125746111987Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-0654.3
NC_019897:73957:926839268393111429Thermobacillus composti KWC4 chromosome, complete genome6e-0652.4