Pre_GI: BLASTP Hits

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Query: NC_009140:60806:68817 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 68817, End: 70046, Length: 1230

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009140:60806:7228372283735121230Salmonella enterica enterica sv Newport str. SL254, completebeta-lactamase0770
NC_015224:2095816:2111842211184221130081167Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,beta-lactamase2e-110399
NC_005126:949226:9628659628659640341170Photorhabdus luminescens subsp. laumondii TTO1, complete genomebeta-lactamase class C (cephalosporinase)2e-88326
NC_012962:869295:8772988772988784551158Photorhabdus asymbiotica, complete genomeampc-type class c beta-lactamase3e-87322
NC_008596:4043213:4046936404693640480781143Mycobacterium smegmatis str. MC2 155, complete genomebeta-lactamase2e-72273
NC_020064:2728569:2735384273538427365171134Serratia marcescens FGI94, complete genomepenicillin-binding protein, beta-lactamase class C3e-70266
NC_009832:2460027:2474186247418624753221137Serratia proteamaculans 568, complete genomebeta-lactamase1e-69263
NC_011958:923789:9295469295469307691224Rhodobacter sphaeroides KD131 chromosome 2, complete genomebeta-lactamase2e-56220
NC_007494:867901:8745598745598757011143Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative beta-lactamase precursor7e-56218
NC_000868:133451:1380441380441393871344Pyrococcus abyssi GE5, complete genomehypothetical beta-lactamase precursor (penicillin-binding protein)2e-1997.1
NC_020181:473170:4800494800494815541506Enterobacter aerogenes EA1509E, complete genomeBeta-lactamase7e-1995.5
NC_009954:117895:1406611406611420221362Caldivirga maquilingensis IC-167, complete genomebeta-lactamase9e-1995.1
NC_009792:859228:8661528661528676121461Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-1995.1
NC_014837:3126543:3132352313235231335211170Pantoea sp. At-9b chromosome, complete genomebeta-lactamase1e-1791.3
NC_015151:2285175:5134513464891356Vulcanisaeta moutnovskia 768-28 chromosome, complete genomebeta-lactamase2e-1790.5
NC_014824:263491:2758452758452773261482Ruminococcus albus 7 plasmid pRUMAL01, complete sequencebeta-lactamase1e-1584.7
NC_019902:2943719:2944563294456329459721410Thioalkalivibrio nitratireducens DSM 14787, complete genomeBeta-lactamase1e-1481.6
NC_012214:474359:4926224926224937971176Erwinia pyrifoliae Ep1/96, complete genomePenicillin-binding protein1e-1481.3
NC_014364:2717865:2727172272717227288901719Spirochaeta smaragdinae DSM 11293 chromosome, complete genomebeta-lactamase1e-1481.3
NC_013730:4440943:4446568444656844481991632Spirosoma linguale DSM 74, complete genomebeta-lactamase4e-1479.3
NC_014931:3642779:3648036364803636497391704Variovorax paradoxus EPS chromosome, complete genomebeta-lactamase5e-1479.3
NC_014328:3823902:3843374384337438452121839Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative beta-lactamase7e-1479
NC_013961:441719:4758934758934771341242Erwinia amylovora, complete genomePenicillin-binding protein ampH1e-1378.2
NC_007517:1676604:1708413170841317102001788Geobacter metallireducens GS-15, complete genomeBeta-lactamase1e-1377.8
NC_008095:2450500:2465541246554124669531413Myxococcus xanthus DK 1622, complete genomebeta-lactamase2e-1377.8
NC_015510:1096755:1116422111642211176631242Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomebeta-lactamase2e-1377
NC_013222:1659619:1664564166456416656551092Robiginitalea biformata HTCC2501, complete genomebeta-lactamase precursor4e-1376.3
NC_004578:5269194:527426752742675275259993Pseudomonas syringae pv. tomato str. DC3000, complete genomealkaline D-peptidase, putative7e-1375.5
NC_014032:338547:3649483649483661081161Salinibacter ruber M8 chromosome, complete genomebeta-lactamase8e-1375.1
NC_020126:6019850:6035252603525260367211470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase4e-1272.8
NC_017047:4298207:4308717430871743098561140Rahnella aquatilis HX2 chromosome, complete genomebeta-lactam binding protein AmpH5e-1272.8
NC_015061:4203767:4214776421477642159151140Rahnella sp. Y9602 chromosome, complete genomebeta-lactamase5e-1272.8
NC_015690:4361000:4424844442484444259951152Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAlkaline D-peptidase and alkaline D-peptidase fusion5e-1272.4
NC_016818:4215836:4239496423949642406921197Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completepenicillin-binding protein, beta-lactamase class C7e-1272
NC_016935:4117485:4190913419091341920641152Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase8e-1272
NC_015510:4905345:4905345490534549064541110Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomebeta-lactamase8e-1271.6
NC_008228:2295841:2305171230517123062801110Pseudoalteromonas atlantica T6c, complete genomebeta-lactamase1e-1170.9
NC_006177:324363:3377843377843389351152Symbiobacterium thermophilum IAM 14863, complete genomeputative beta-lactamase2e-1170.5
NC_019897:700332:7379537379537399892037Thermobacillus composti KWC4 chromosome, complete genomepenicillin-binding protein, beta-lactamase class C3e-1170.1
NC_016642:3554000:3567511356751135690011491Pseudovibrio sp. FO-BEG1 chromosome, complete genomeBeta-lactamase class C4e-1169.7
NC_011832:820658:8947328947328959551224Candidatus Methanosphaerula palustris E1-9c, complete genomebeta-lactamase4e-1169.7
NC_007912:529500:5378175378175388451029Saccharophagus degradans 2-40, complete genome5,10-methylenetetrahydrofolate reductase4e-1169.7
NC_015690:7334786:7341798734179873437951998Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-1067.8
NC_010546:3071377:3073581307358130789535373Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein2e-1067.8
NC_014622:4922977:4980081498008149812381158Paenibacillus polymyxa SC2 chromosome, complete genomed-alanyl-d-alanine carboxypeptidase (penicillin-binding protein)2e-1067
NC_020418:116500:1508081508081520311224Morganella morganii subsp. morganii KT, complete genomePenicillin-binding protein AmpH3e-1066.6
NC_012491:1293086:1319612131961213216001989Brevibacillus brevis NBRC 100599, complete genomehypothetical protein4e-1066.2
NC_016935:7426389:7431878743187874338721995Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein6e-1065.5
NC_013730:5989387:5989387598938759906341248Spirosoma linguale DSM 74, complete genomebeta-lactamase6e-1065.5
NC_004193:701622:7038557038557053391485Oceanobacillus iheyensis HTE831, complete genomebeta-lactamase7e-1065.5
NC_020126:6019850:6033705603370560351741470Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase2e-0963.9
NC_014834:959986:9909259909259921991275Rhodopseudomonas palustris DX-1 chromosome, complete genomebeta-lactamase2e-0963.9
NC_018679:2211000:222225022222502223161912Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completebeta-lactamase2e-0963.5
NC_014934:2482934:2496052249605224971281077Cellulophaga algicola DSM 14237 chromosome, complete genomebeta-lactamase2e-0963.5
NC_008536:3160540:3184645318464531858501206Solibacter usitatus Ellin6076, complete genomebeta-lactamase3e-0963.5
NC_015761:1181186:1186601118660111882321632Salmonella bongori NCTC 12419, complete genomebeta-lactamase4e-0963.2
UCMB5137:174593:2016412016412036502010Bacillus atrophaeus UCMB-5137penicillin-binding protein6e-0962.4
NC_019902:2943719:2954321295432129560301710Thioalkalivibrio nitratireducens DSM 14787, complete genomebeta-lactamase6e-0962.4
NC_020126:8984500:8988091898809189894581368Myxococcus stipitatus DSM 14675, complete genomebeta-lactamase8e-0962
NC_015690:2369510:2377209237720923788731665Paenibacillus mucilaginosus KNP414 chromosome, complete genomebeta-lactamase1e-0861.6
NC_020156:49666:6522065220662601041Nonlabens dokdonensis DSW-6, complete genomebeta-lactamase1e-0861.6
NC_016935:2918689:2925776292577629272301455Paenibacillus mucilaginosus 3016 chromosome, complete genomebeta-lactamase1e-0861.2
NC_016641:4011000:4018422401842240205692148Paenibacillus terrae HPL-003 chromosome, complete genomebeta-lactamase2e-0860.8
NC_016935:7426389:7436208743620874383642157Paenibacillus mucilaginosus 3016 chromosome, complete genomealkaline D-peptidase, serine peptidase, merops family s122e-0860.8
NC_015690:7334786:7344146734414673463052160Paenibacillus mucilaginosus KNP414 chromosome, complete genomealkaline D-peptidase; serine peptidase; merops family s122e-0860.8
NC_016582:9076686:9095636909563690968111176Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-lactamase3e-0860.1
NC_013406:3975512:3992797399279739942751479Paenibacillus sp. Y412MC10 chromosome, complete genomebeta-lactamase4e-0859.7
NC_015953:3456535:3504980350498035061971218Streptomyces sp. SirexAA-E chromosome, complete genomebeta-lactamase4e-0859.7
NC_013730:3956457:3956457395645739580311575Spirosoma linguale DSM 74, complete genomebeta-lactamase4e-0859.7
NC_015510:6653159:6690116669011666916091494Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomebeta-lactamase5e-0859.3
NC_012491:6143928:6165290616529061664741185Brevibacillus brevis NBRC 100599, complete genomeputative D-stereospecific peptide hydrolase5e-0859.3
NC_018678:2140182:215831521583152159238924Alteromonas macleodii str. 'English Channel 673' chromosome,beta-lactamase6e-0858.9
NC_011894:6731115:6745775674577567468841110Methylobacterium nodulans ORS 2060, complete genomebeta-lactamase7e-0858.9
NC_015690:1109335:1142938114293811450132076Paenibacillus mucilaginosus KNP414 chromosome, complete genomebeta-lactamase9e-0858.5
NC_016935:1636278:1707680170768017097552076Paenibacillus mucilaginosus 3016 chromosome, complete genomebeta-lactamase9e-0858.5
NC_014729:1248782:1266390126639012683391950Halogeometricum borinquense DSM 11551 chromosome, complete genomepenicillin-binding protein, beta-lactamase class c8e-0858.5
NC_014816:545441:5637285637285654191692Asticcacaulis excentricus CB 48 chromosome 1, complete sequencebeta-lactamase8e-0858.5
NC_013222:1898164:190692019069201907873954Robiginitalea biformata HTCC2501, complete genomeserine-type D-Ala-D-Ala carboxypeptidase1e-0758.2
NC_013510:1295439:1299340129934013007191380Thermomonospora curvata DSM 43183, complete genomebeta-lactamase1e-0758.2
NC_012880:135508:1590171590171605281512Dickeya dadantii Ech703, complete genomebeta-lactamase1e-0757.8
NC_002947:1268089:1291208129120812923531146Pseudomonas putida KT2440, complete genomecarboxylesterase2e-0757.4
NC_014165:374674:3916893916893931371449Thermobispora bispora DSM 43833 chromosome, complete genomebeta-lactamase2e-0757.4
NC_008700:1627401:1640228164022816413821155Shewanella amazonensis SB2B, complete genomebeta-lactamase class C-like protein2e-0757
NC_007645:3756654:3771508377150837725631056Hahella chejuensis KCTC 2396, complete genomeBeta-lactamase class C and other penicillin binding protein6e-0755.8
NC_014622:5662000:5662262566226256641241863Paenibacillus polymyxa SC2 chromosome, complete genomepenicillin-binding protein6e-0755.5
NC_013947:460398:4878834878834892501368Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebeta-lactamase7e-0755.5
NC_018681:3541484:3544501354450135457541254Nocardia brasiliensis ATCC 700358 chromosome, complete genomebeta-lactamase8e-0755.5
NC_011761:1904637:1925808192580819270941287Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completebeta-lactamase8e-0755.5
NC_013757:2630000:2641547264154726427971251Geodermatophilus obscurus DSM 43160, complete genomebeta-lactamase1e-0655.1
NC_015588:2468207:2484809248480924862031395Isoptericola variabilis 225 chromosome, complete genomebeta-lactamase1e-0655.1
NC_011206:1792621:1811382181138218127401359Acidithiobacillus ferrooxidans ATCC 53993, complete genomebeta-lactamase8e-0755.1
NC_014666:4547873:4548457454845745496651209Frankia sp. EuI1c chromosome, complete genomebeta-lactamase2e-0653.9
NC_010338:3743000:3788584378858437897261143Caulobacter sp. K31, complete genomebeta-lactamase2e-0653.9
NC_013892:2638451:2656548265654826597333186Xenorhabdus bovienii SS-2004 chromosome, complete genomexenobiotic-transporting ATPase4e-0653.1
NC_014623:4999032:5005756500575650073811626Stigmatella aurantiaca DW4/3-1 chromosome, complete genomebeta-lactamase family protein4e-0652.8
NC_013729:4871430:4887632488763248887861155Kribbella flavida DSM 17836, complete genomebeta-lactamase4e-0652.8
NC_010407:2406113:2422966242296624249992034Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative beta-lactamase6e-0652.4
NC_012489:3503632:3505547350554735073461800Gemmatimonas aurantiaca T-27, complete genomebeta-lactamase family protein8e-0652
NC_015690:4643869:4648253464825346501691917Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein9e-0651.6
NC_016935:4367000:4385247438524743871541908Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein9e-0651.6
NC_006347:4031000:4040529404052940421421614Bacteroides fragilis YCH46, complete genomeputative peptidase1e-0551.6
NC_016776:3973428:3982941398294139845541614Bacteroides fragilis 638R, complete genomeputative exported beta-lactamase protein1e-0551.6