Pre_GI: BLASTP Hits

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Query: NC_009140:60806:67753 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 67753, End: 68193, Length: 441

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009140:60806:741367413674576441Salmonella enterica enterica sv Newport str. SL254, completequaternary ammonium compound-resistance protein SugE21e-65248
NC_015663:1934863:195033119503311950648318Enterobacter aerogenes KCTC 2190 chromosome, complete genomesmall multidrug resistance protein6e-32135
NC_016612:1840325:186020318602031860520318Klebsiella oxytoca KCTC 1686 chromosome, complete genomesmall multidrug resistance protein1e-31134
NC_020181:3518396:352054735205473520864318Enterobacter aerogenes EA1509E, complete genomeQuaternary ammonium compound-resistance protein sugE1e-31134
NC_011283:5170683:517209251720925172409318Klebsiella pneumoniae 342 chromosome, complete genomequaternary ammonium compound-resistance protein SugE2e-31134
NC_013850:4993307:499546149954614995778318Klebsiella variicola At-22 chromosome, complete genomesmall multidrug resistance protein2e-31134
NC_009648:4958500:497850649785064978823318Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomequarternary ammonium compound transport protein3e-30130
NC_012731:403670:423636423636423953318Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomequarternary ammonium compound transport protein3e-30130
NC_016845:411844:432140432140432457318Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,quarternary ammonium compound transport protein3e-30130
NC_009253:3272000:327410332741033274423321Desulfotomaculum reducens MI-1 chromosome, complete genomesmall multidrug resistance protein2e-21100
NC_012660:2045398:204737720473772047691315Pseudomonas fluorescens SBW25 chromosome, complete genomequaternary ammonium compound-resistance protein8e-2199
NC_018080:1730534:173289317328931733207315Pseudomonas aeruginosa DK2 chromosome, complete genometransporter3e-2097.1
NC_003888:3138905:315338931533893153709321Streptomyces coelicolor A3(2), complete genomemolecular chaperone3e-1993.6
NC_006510:591339:632275632275632595321Geobacillus kaustophilus HTA426, complete genomechaperone protein9e-1992
NC_010511:7024412:705008570500857050405321Methylobacterium sp. 4-46 chromosome, complete genomesmall multidrug resistance protein2e-1891.3
NC_015954:1662129:167945316794531679776324Halophilic archaeon DL31 chromosome, complete genomesmall multidrug resistance protein3e-1890.5
NC_007086:557789:577500577500577814315Xanthomonas campestris pv. campestris str. 8004, complete genomeSugE protein3e-1890.5
NC_003902:555699:575410575410575724315Xanthomonas campestris pv. campestris str. ATCC 33913, completeSugE protein3e-1890.5
NC_016631:1757788:176772117677211768053333Granulicella mallensis MP5ACTX8 chromosome, complete genomesmall multidrug resistance protein4e-1890.1
NC_015953:2640500:265221626522162652536321Streptomyces sp. SirexAA-E chromosome, complete genomesmall multidrug resistance protein4e-1786.7
NC_016626:1825845:185346618534661853777312Burkholderia sp. YI23 plasmid byi_1p, complete sequencesmall multidrug resistance protein6e-1786.3
NC_011894:3090000:309579230957923096112321Methylobacterium nodulans ORS 2060, complete genomesmall multidrug resistance protein8e-1785.9
NC_016830:3230939:324705332470533247370318Pseudomonas fluorescens F113 chromosome, complete genomeSugE protein1e-1685.1
NC_015379:3736500:374577337457733746090318Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative quaternary ammonium compound-resistance protein1e-1685.1
NC_016114:4614924:462354046235404623860321Streptomyces flavogriseus ATCC 33331 chromosome, complete genomesmall multidrug resistance protein2e-1684.7
NC_007712:2806500:285065328506532850973321Sodalis glossinidius str. 'morsitans', complete genomeGroEL supressor protein SugE3e-1684
NC_013744:300000:325888325888326223336Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completesmall multidrug resistance protein3e-1684
NC_015658:319296:331326331326331649324Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequencesmall multidrug resistance protein9e-1682.4
NC_017192:1841987:186150518615051861831327Arcobacter sp. L, complete genomemultidrug resistance protein3e-1477
NC_015572:1974000:199254119925411992861321Methylomonas methanica MC09 chromosome, complete genomesmall multidrug resistance protein2e-1374.3
NC_007333:1457000:146525614652561465570315Thermobifida fusca YX, complete genomesmall multidrug resistance protein, SMR family5e-1373.2
NC_015953:4908069:491158149115814911904324Streptomyces sp. SirexAA-E chromosome, complete genomesmall multidrug resistance protein5e-1373.2
NC_011958:735755:757588757588757875288Rhodobacter sphaeroides KD131 chromosome 2, complete genomeSmall multidrug resistance protein6e-1372.8
NC_014550:7560:187161871619033318Arthrobacter arilaitensis Re117, complete genomequaternary ammonium compound-resistance protein SugE6e-1372.8
NC_008391:1210451:121572012157201216064345Burkholderia cepacia AMMD chromosome 2, complete sequencesmall multidrug resistance protein4e-1063.5
NC_020244:3358399:336421033642103364530321Bacillus subtilis XF-1, complete genomehypothetical protein1e-0962
NC_002927:1292573:129469312946931295028336Bordetella bronchiseptica RB50, complete genomeputative chaperone1e-0962
NC_006322:1959918:196277519627751963092318Bacillus licheniformis ATCC 14580, complete genomeYvdR2e-0961.2
NC_020995:789665:804728804728805048321Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-0959.7
NC_015690:2039215:206836520683652068679315Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYkkD8e-0959.3
NC_014366:1814000:181793518179351818267333Gamma proteobacterium HdN1, complete genomeQuaternary ammonium compound resistance protein1e-0858.9
NC_016935:2567039:261789426178942618208315Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0857.8
NC_014019:3543389:356575035657503566112363Bacillus megaterium QM B1551 chromosome, complete genomemultidrug resistance protein, SMR family3e-0857.4
NC_013768:1802313:181707318170731817396324Listeria monocytogenes 08-5923, complete genomesmall multidrug resistance protein, SMR family3e-0857.4
NC_013766:1835964:185034218503421850665324Listeria monocytogenes 08-5578 chromosome, complete genomesmall multidrug resistance protein, SMR family3e-0857.4
NC_006856:26438:392213922139553333Salmonella enterica subsp. enterica serovar Choleraesuis strquaternary ammonium compound resistance protein3e-0857
NC_017506:971482:974058974058974390333Marinobacter adhaerens HP15 chromosome, complete genomesmall multidrug resistance protein4e-0857
NC_013169:2045000:205962220596222059939318Kytococcus sedentarius DSM 20547, complete genomecation/cationic drug transporter1e-0755.5
NC_015589:2049328:205287220528722053192321Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesmall multidrug resistance protein2e-0754.3
NC_007802:1240989:125249212524921252809318Jannaschia sp. CCS1, complete genomesmall multidrug resistance protein7e-0752.8
NC_008319:615135:616654616654616983330Synechococcus sp. CC9311, complete genomepossible drug resistance protein7e-0752.8
NC_015761:1630000:163487516348751635213339Salmonella bongori NCTC 12419, complete genomemultidrug transporter9e-0752.4
NC_020272:20435:252212522125604384Bacillus amyloliquefaciens IT-45, complete genomeSpermidine export protein mdtJ1e-0652
NC_011149:1429523:146019614601961460534339Salmonella enterica subsp. enterica serovar Agona str. SL483,multidrug transporter EmrE1e-0652
NC_019842:3921424:393298739329873933364378Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Spermidine export protein mdtJ2e-0651.6
NC_017188:419000:432818432818433180363Bacillus amyloliquefaciens TA208 chromosome, complete genomeYvaE2e-0651.6
NC_017190:424000:437491437491437853363Bacillus amyloliquefaciens LL3 chromosome, complete genomesmall multidrug resistance protein, SMR family2e-0651.6
NC_017191:425000:438728438728439090363Bacillus amyloliquefaciens XH7 chromosome, complete genomemetabolite-efflux transporter2e-0651.6
NC_016641:1369424:137771513777151378086372Paenibacillus terrae HPL-003 chromosome, complete genomemembrane transporter2e-0651.2
NC_011294:1465500:148213214821321482470339Salmonella enterica subsp. enterica serovar Enteritidis strmulti-drug transporter3e-0650.8
NC_005061:594500:611253611253611582330Candidatus Blochmannia floridanus, complete genomeemrE protein (methyl viologen resistance protein C) (ethidium resistance protein)5e-0650.1
NC_013410:1491000:150255015025501502882333Fibrobacter succinogenes subsp. succinogenes S85 chromosome,small multidrug resistance protein6e-0649.7
NC_015589:2049328:205251320525132052875363Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesmall multidrug resistance protein9e-0649.3
NC_006322:1959918:196244019624401962775336Bacillus licheniformis ATCC 14580, complete genomeYvdS9e-0648.9
NC_014306:1981956:199145019914501991785336Erwinia billingiae Eb661, complete genomehypothetical protein1e-0548.9