Pre_GI: BLASTP Hits

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Query: NC_009140:60806:60102 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 60102, End: 60809, Length: 708

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009140:60806:8152081520839672448Salmonella enterica enterica sv Newport str. SL254, completetype IV conjugative transfer system protein TraC3e-141500
NC_014228:2270000:230393123039312304296366Xenorhabdus nematophila ATCC 19061, complete genome8e-59226
NC_010554:2646806:2689243268924326916422400Proteus mirabilis HI4320, complete genomeplasmid pilus assembly protein3e-46185
NC_010814:243384:2914532914532939002448Geobacter lovleyi SZ, complete genomesex pilus assembly protein4e-1065.1
NC_008607:144000:1522441522441546942451Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequencesex pilus assembly protein4e-0858.5
NC_010793:1811401:1851185185118518536742490Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraC9e-0753.9