Pre_GI: BLASTP Hits

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Query: NC_009140:121107:127059 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 127059, End: 127961, Length: 903

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009838:81913:975759757598477903Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceAac3-VI7e-165579
NC_016861:22256:407634076341623861Salmonella enterica subsp. enterica serovar Typhimurium straminoglycoside 3-N-acetyltransferase9e-67253
NC_014364:2246524:227958822795882280421834Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeAminoglycoside N(3')-acetyltransferase1e-29130
NC_015635:932240:932240932240933037798Microlunatus phosphovorus NM-1, complete genomeputative aminoglycoside 3-N-acetyltransferase6e-28124
NC_009142:3943829:396547239654723965984513Saccharopolyspora erythraea NRRL 2338, complete genomeaminoglycoside N3'-acetyltransferase protein1e-21103
NC_017325:967598:988055988055988939885Sinorhizobium meliloti SM11 chromosome, complete genomeaminoglycoside N3-acetyltransferase2e-1790.1
NC_003047:2477810:248042824804282481246819Sinorhizobium meliloti 1021, complete genomePROBABLE AMINOGLYCOSIDE N3'-ACETYLTRANSFERASE PROTEIN2e-1789.7
NC_015590:2290359:229297722929772293795819Sinorhizobium meliloti AK83 chromosome 1, complete sequenceaminoglycoside N3-acetyltransferase2e-1789.7
NC_017322:2191391:219400921940092194827819Sinorhizobium meliloti BL225C chromosome, complete genomeaminoglycoside N3-acetyltransferase2e-1789.7
NC_013235:593289:608609608609609181573Nakamurella multipartita DSM 44233, complete genomeaminoglycoside 3-N-acetyltransferase4e-1582
NC_016803:198178:210526210526211329804Desulfovibrio desulfuricans ND132 chromosome, complete genomeaminoglycoside 3-N-acetyltransferase1e-0757.4
NC_009142:3943829:396510339651033965366264Saccharopolyspora erythraea NRRL 2338, complete genomeaminoglycoside acetyltransferase2e-0756.6
NC_009783:670449:687141687141688016876Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-0653.5