Pre_GI: BLASTN Hits

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Query: NC_009092:521519 Shewanella loihica PV-4, complete genome

Start: 521519, End: 545931, Length: 24413

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome01368BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome01310BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome01193BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome01090BLASTN svgBLASTP svg
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-161577BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome1e-147531BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome9e-136492BLASTN svgBLASTP svg
NC_015663:19348631934863195458219720Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-128468BLASTN svgBLASTP svg
NC_020181:3518396*3518396354042322028Enterobacter aerogenes EA1509E, complete genome8e-124452BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome3e-114420BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome1e-57232BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome1e-45192BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome7e-41176BLASTN svgBLASTP svg
NC_012968:43553243553246033724806Methylotenera mobilis JLW8, complete genome1e-36163BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome9e-28133BLASTN svgBLASTP svg
NC_009052:43357544335754435735621603Shewanella baltica OS155, complete genome1e-26129BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete6e-23117BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome5e-20107BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete5e-20107BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_005955:1259393*1259393127892419532Bartonella quintana str. Toulouse, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002935:20596722059672207754417873Corynebacterium diphtheriae NCTC 13129, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002179:66718266718268743020249Chlamydophila pneumoniae AR39, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002491:15632515632517436718043Chlamydophila pneumoniae J138, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011566:47096724709672473260322932Shewanella piezotolerans WP3, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011830:15044971504497153619331697Desulfitobacterium hafniense DCB-2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020156:90375490375492804124288Nonlabens dokdonensis DSW-6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013406:59544725954472597839723926Paenibacillus sp. Y412MC10 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008095:55277075527707555977932073Myxococcus xanthus DK 1622, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015711:74715007471500749740725908Myxococcus fulvus HW-1 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005061:65861*658618718421324Candidatus Blochmannia floridanus, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014734:1428282*1428282145110222821Paludibacter propionicigenes WB4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007722:85112985112987648525357Erythrobacter litoralis HTCC2594, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014833:97931*9793111843720507Ruminococcus albus 7 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg