Pre_GI: BLASTN Hits

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Query: NC_009092:4585784 Shewanella loihica PV-4, complete genome

Start: 4585784, End: 4615499, Length: 29716

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,08138BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome2e-87331BLASTN svgBLASTP svg
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome2e-84321BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome9e-78299BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome3e-74287BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome8e-69270BLASTN svgBLASTP svg
NC_006905:3780000*3780000380296822969Salmonella enterica subsp. enterica serovar Choleraesuis str5e-67264BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome1e-64256BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome1e-64256BLASTN svgBLASTP svg
NC_013961:3709800*3709800373182522026Erwinia amylovora, complete genome2e-57232BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome2e-54222BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome4e-52214BLASTN svgBLASTP svg
NC_012214:3931824*3931824395459922776Erwinia pyrifoliae Ep1/96, complete genome1e-45192BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome5e-33151BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome2e-32149BLASTN svgBLASTP svg
NC_010611:3879190*3879190390849929310Acinetobacter baumannii ACICU, complete genome4e-24121BLASTN svgBLASTP svg
NC_003919:4946884*4946884497347526592Xanthomonas axonopodis pv. citri str. 306, complete genome3e-19105BLASTN svgBLASTP svg
NC_008313:113975239752Ralstonia eutropha H16 chromosome 1, complete sequence1e-18103BLASTN svgBLASTP svg
NC_009648:4497749*4497749452411726369Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-18103BLASTN svgBLASTP svg
NC_015224:4473230*4473230449714523916Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-18101BLASTN svgBLASTP svg
NC_007614:620500*62050064203621537Nitrosospira multiformis ATCC 25196 chromosome 1, complete2e-1799.6BLASTN svgBLASTP svg
NC_015968:4790239*4790239481349923261Enterobacter asburiae LF7a chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014323:111610816108Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007298:3764048*3764048379032226275Dechloromonas aromatica RCB, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-1283.8BLASTN svgBLASTP svg
NC_015976:1893076*1893076193522042145Sphingobium sp. SYK-6, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete1e-1179.8BLASTN svgBLASTP svg
NC_008702:815264*81526484609430831Azoarcus sp. BH72, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005085:111651116511Chromobacterium violaceum ATCC 12472, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008576:4701930*4701930473149929570Magnetococcus sp. MC-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009076:75535*7553510652630992Burkholderia pseudomallei 1106a chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_015572:115300753007Methylomonas methanica MC09 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011979:4293859*4293859431999926141Geobacter sp. FRC-32, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010814:409940992609221994Geobacter lovleyi SZ, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007907:34724943472494349615323660Desulfitobacterium hafniense Y51, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013165:3146000*3146000318049934500Slackia heliotrinireducens DSM 20476, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_005070:1588419*1588419161715628738Synechococcus sp. WH 8102, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014228:4408500*4408500443149923000Xenorhabdus nematophila ATCC 19061, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015677:112102721027Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003901:28625002862500288597823479Methanosarcina mazei Go1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004556:111809918099Xylella fastidiosa Temecula1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007644:3229*32292661523387Moorella thermoacetica ATCC 39073, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008702:111506115061Azoarcus sp. BH72, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010577:111809918099Xylella fastidiosa M23, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010577:2513241*2513241254349930259Xylella fastidiosa M23, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015856:112197121971Collimonas fungivorans Ter331 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002939:579087*57908760819229106Geobacter sulfurreducens PCA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014935:1834569*1834569185596821400Nitratifractor saLSUginis DSM 16511 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007347:1*12859628596Ralstonia eutropha JMP134 chromosome 1, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_007516:774489*77448981616441676Synechococcus sp. CC9605, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015138:111600416004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_015387:1344467*1344467136650122035Marinithermus hydrothermalis DSM 14884 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_020409:437781*43778150239464614Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014363:2035141*2035141206649931359Olsenella uli DSM 7084 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg